Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA1P49639 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA1P49639 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA1P49639 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA1P49639 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA1P49639 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA1P49639 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
HOXA1P49639 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA1P49639 BID-204ENST00000399767 2129 ntTSL 2 BASIC16.65■□□□□ 0.26
HOXA1P49639 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
HOXA1P49639 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.65■□□□□ 0.26
HOXA1P49639 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA1P49639 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA1P49639 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC16.65■□□□□ 0.26
HOXA1P49639 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA1P49639 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC16.65■□□□□ 0.26
HOXA1P49639 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA1P49639 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA1P49639 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA1P49639 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA1P49639 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.65■□□□□ 0.26
HOXA1P49639 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.65■□□□□ 0.26
HOXA1P49639 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA1P49639 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA1P49639 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
HOXA1P49639 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
HOXA1P49639 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
HOXA1P49639 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA1P49639 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
HOXA1P49639 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
HOXA1P49639 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA1P49639 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.64■□□□□ 0.25
HOXA1P49639 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA1P49639 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA1P49639 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.64■□□□□ 0.25
HOXA1P49639 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC16.64■□□□□ 0.25
HOXA1P49639 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA1P49639 AL136162.1-201ENST00000607711 1078 ntBASIC16.64■□□□□ 0.25
HOXA1P49639 AC105233.4-201ENST00000642045 216 ntBASIC16.64■□□□□ 0.25
HOXA1P49639 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA1P49639 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC16.64■□□□□ 0.25
HOXA1P49639 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA1P49639 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA1P49639 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA1P49639 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
HOXA1P49639 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA1P49639 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
HOXA1P49639 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA1P49639 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA1P49639 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
HOXA1P49639 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
HOXA1P49639 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HOXA1P49639 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXA1P49639 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXA1P49639 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXA1P49639 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.63■□□□□ 0.25
HOXA1P49639 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HOXA1P49639 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HOXA1P49639 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXA1P49639 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXA1P49639 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
HOXA1P49639 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HOXA1P49639 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXA1P49639 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
HOXA1P49639 GRAMD4P2-201ENST00000423297 1097 ntBASIC16.63■□□□□ 0.25
HOXA1P49639 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC16.63■□□□□ 0.25
HOXA1P49639 AC024257.2-201ENST00000549699 147 ntBASIC16.63■□□□□ 0.25
HOXA1P49639 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HOXA1P49639 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HOXA1P49639 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
HOXA1P49639 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC16.63■□□□□ 0.25
HOXA1P49639 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXA1P49639 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXA1P49639 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
HOXA1P49639 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.63■□□□□ 0.25
HOXA1P49639 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXA1P49639 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXA1P49639 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXA1P49639 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXA1P49639 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HOXA1P49639 AC055733.4-201ENST00000638462 1354 ntBASIC16.63■□□□□ 0.25
HOXA1P49639 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.62■□□□□ 0.25
HOXA1P49639 AC005224.4-201ENST00000583262 1652 ntBASIC16.62■□□□□ 0.25
HOXA1P49639 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
HOXA1P49639 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HOXA1P49639 AC007225.1-201ENST00000566331 1836 ntBASIC16.62■□□□□ 0.25
HOXA1P49639 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXA1P49639 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HOXA1P49639 LHPP-203ENST00000392757 840 ntTSL 3 BASIC16.62■□□□□ 0.25
HOXA1P49639 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXA1P49639 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HOXA1P49639 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC16.62■□□□□ 0.25
HOXA1P49639 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC16.62■□□□□ 0.25
HOXA1P49639 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC16.62■□□□□ 0.25
HOXA1P49639 AC008764.7-201ENST00000593779 1081 ntBASIC16.62■□□□□ 0.25
HOXA1P49639 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC16.62■□□□□ 0.25
HOXA1P49639 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.62■□□□□ 0.25
HOXA1P49639 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC16.62■□□□□ 0.25
HOXA1P49639 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.62■□□□□ 0.25
HOXA1P49639 AC135279.3-201ENST00000610945 1311 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms