Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PCP4P48539 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PCP4P48539 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC14.02□□□□□ -0.16
PCP4P48539 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.02□□□□□ -0.16
PCP4P48539 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PCP4P48539 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PCP4P48539 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
PCP4P48539 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
PCP4P48539 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
PCP4P48539 LINC02228-204ENST00000642115 2962 ntBASIC14.02□□□□□ -0.17
PCP4P48539 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
PCP4P48539 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
PCP4P48539 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PCP4P48539 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PCP4P48539 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
PCP4P48539 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PCP4P48539 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PCP4P48539 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PCP4P48539 PRAL-201ENST00000624952 3286 ntBASIC14.02□□□□□ -0.17
PCP4P48539 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
PCP4P48539 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
PCP4P48539 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PCP4P48539 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PCP4P48539 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PCP4P48539 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PCP4P48539 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PCP4P48539 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PCP4P48539 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC14.01□□□□□ -0.17
PCP4P48539 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PCP4P48539 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC14.01□□□□□ -0.17
PCP4P48539 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
PCP4P48539 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
PCP4P48539 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PCP4P48539 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PCP4P48539 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PCP4P48539 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.01□□□□□ -0.17
PCP4P48539 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PCP4P48539 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PCP4P48539 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
PCP4P48539 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PCP4P48539 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PCP4P48539 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PCP4P48539 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PCP4P48539 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PCP4P48539 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PCP4P48539 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC14.01□□□□□ -0.17
PCP4P48539 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PCP4P48539 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PCP4P48539 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC14.01□□□□□ -0.17
PCP4P48539 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PCP4P48539 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PCP4P48539 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
PCP4P48539 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
PCP4P48539 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC14□□□□□ -0.17
PCP4P48539 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC14□□□□□ -0.17
PCP4P48539 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
PCP4P48539 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PCP4P48539 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
PCP4P48539 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PCP4P48539 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PCP4P48539 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
PCP4P48539 AC073314.1-201ENST00000568729 2216 ntBASIC14□□□□□ -0.17
PCP4P48539 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PCP4P48539 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14□□□□□ -0.17
PCP4P48539 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PCP4P48539 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
PCP4P48539 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14□□□□□ -0.17
PCP4P48539 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14□□□□□ -0.17
PCP4P48539 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC14□□□□□ -0.17
PCP4P48539 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PCP4P48539 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC14□□□□□ -0.17
PCP4P48539 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
PCP4P48539 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PCP4P48539 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
PCP4P48539 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PCP4P48539 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCP4P48539 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC13.99□□□□□ -0.17
PCP4P48539 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCP4P48539 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PCP4P48539 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCP4P48539 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC13.99□□□□□ -0.17
PCP4P48539 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PCP4P48539 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCP4P48539 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCP4P48539 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCP4P48539 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCP4P48539 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCP4P48539 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC13.99□□□□□ -0.17
PCP4P48539 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCP4P48539 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PCP4P48539 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC13.99□□□□□ -0.17
PCP4P48539 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
PCP4P48539 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCP4P48539 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC13.99□□□□□ -0.17
PCP4P48539 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCP4P48539 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCP4P48539 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCP4P48539 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
PCP4P48539 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCP4P48539 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms