Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GABRA4P48169 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
GABRA4P48169 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GABRA4P48169 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GABRA4P48169 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
GABRA4P48169 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GABRA4P48169 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.17■□□□□ 0.66
GABRA4P48169 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GABRA4P48169 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.17■□□□□ 0.66
GABRA4P48169 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
GABRA4P48169 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.17■□□□□ 0.66
GABRA4P48169 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.17■□□□□ 0.66
GABRA4P48169 AL359736.2-201ENST00000621992 437 ntBASIC19.17■□□□□ 0.66
GABRA4P48169 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.17■□□□□ 0.66
GABRA4P48169 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
GABRA4P48169 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GABRA4P48169 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
GABRA4P48169 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.17■□□□□ 0.66
GABRA4P48169 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GABRA4P48169 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GABRA4P48169 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
GABRA4P48169 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GABRA4P48169 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.16■□□□□ 0.66
GABRA4P48169 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.16■□□□□ 0.66
GABRA4P48169 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GABRA4P48169 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
GABRA4P48169 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
GABRA4P48169 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
GABRA4P48169 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GABRA4P48169 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GABRA4P48169 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
GABRA4P48169 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.16■□□□□ 0.66
GABRA4P48169 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GABRA4P48169 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GABRA4P48169 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GABRA4P48169 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GABRA4P48169 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GABRA4P48169 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.16■□□□□ 0.66
GABRA4P48169 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GABRA4P48169 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.16■□□□□ 0.66
GABRA4P48169 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GABRA4P48169 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GABRA4P48169 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.16■□□□□ 0.66
GABRA4P48169 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GABRA4P48169 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GABRA4P48169 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
GABRA4P48169 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.15■□□□□ 0.66
GABRA4P48169 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
GABRA4P48169 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.15■□□□□ 0.66
GABRA4P48169 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GABRA4P48169 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GABRA4P48169 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
GABRA4P48169 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.15■□□□□ 0.66
GABRA4P48169 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
GABRA4P48169 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
GABRA4P48169 MTDHP1-201ENST00000605323 784 ntBASIC19.15■□□□□ 0.66
GABRA4P48169 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GABRA4P48169 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
GABRA4P48169 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
GABRA4P48169 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GABRA4P48169 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.15■□□□□ 0.66
GABRA4P48169 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
GABRA4P48169 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
GABRA4P48169 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
GABRA4P48169 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
GABRA4P48169 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
GABRA4P48169 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
GABRA4P48169 AL158047.1-201ENST00000445918 881 ntBASIC19.14■□□□□ 0.65
GABRA4P48169 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.14■□□□□ 0.65
GABRA4P48169 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.14■□□□□ 0.65
GABRA4P48169 RPPH1-201ENST00000516869 333 ntBASIC19.14■□□□□ 0.65
GABRA4P48169 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.14■□□□□ 0.65
GABRA4P48169 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.14■□□□□ 0.65
GABRA4P48169 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.14■□□□□ 0.65
GABRA4P48169 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.14■□□□□ 0.65
GABRA4P48169 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
GABRA4P48169 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
GABRA4P48169 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.14■□□□□ 0.65
GABRA4P48169 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
GABRA4P48169 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
GABRA4P48169 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
GABRA4P48169 AL137060.1-201ENST00000618151 2648 ntBASIC19.14■□□□□ 0.65
GABRA4P48169 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
GABRA4P48169 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.14■□□□□ 0.65
GABRA4P48169 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
GABRA4P48169 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
GABRA4P48169 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.13■□□□□ 0.65
GABRA4P48169 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GABRA4P48169 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.13■□□□□ 0.65
GABRA4P48169 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.13■□□□□ 0.65
GABRA4P48169 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
GABRA4P48169 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.13■□□□□ 0.65
GABRA4P48169 AL031963.3-201ENST00000606441 850 ntBASIC19.13■□□□□ 0.65
GABRA4P48169 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.13■□□□□ 0.65
GABRA4P48169 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
GABRA4P48169 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GABRA4P48169 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
GABRA4P48169 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GABRA4P48169 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GABRA4P48169 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms