Protein–RNA interactions for Protein: P47093

LSM8, U6 snRNA-associated Sm-like protein LSm8, yeastyeast

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM8P47093 CUP1-1YHR053C 186 nt0.19□□□□□ -2.38
LSM8P47093 CUP1-2YHR055C 186 nt0.19□□□□□ -2.38
LSM8P47093 YIL134C-AYIL134C-A 204 nt0.19□□□□□ -2.38
LSM8P47093 RRT1YBL048W 312 nt0.19□□□□□ -2.38
LSM8P47093 TFB6YOR352W 1032 nt0.19□□□□□ -2.38
LSM8P47093 RSM23YGL129C 1353 nt0.19□□□□□ -2.38
LSM8P47093 YPP1YGR198W 2454 nt0.18□□□□□ -2.38
LSM8P47093 YDR133CYDR133C 336 nt0.18□□□□□ -2.38
LSM8P47093 RPS24BYIL069C 408 nt0.18□□□□□ -2.38
LSM8P47093 YKL111CYKL111C 336 nt0.18□□□□□ -2.38
LSM8P47093 YMR153C-AYMR153C-A 336 nt0.18□□□□□ -2.38
LSM8P47093 YPL197CYPL197C 414 nt0.18□□□□□ -2.38
LSM8P47093 APL2YKL135C 2181 nt0.17□□□□□ -2.38
LSM8P47093 CMC1YKL137W 336 nt0.17□□□□□ -2.38
LSM8P47093 YOL159C-AYOL159C-A 273 nt0.17□□□□□ -2.38
LSM8P47093 YAR009CYAR009C 3591 nt0.17□□□□□ -2.38
LSM8P47093 PMP1YCR024C-A 123 nt0.16□□□□□ -2.38
LSM8P47093 YDR220CYDR220C 294 nt0.16□□□□□ -2.38
LSM8P47093 SBH1YER087C-B 249 nt0.16□□□□□ -2.38
LSM8P47093 RPL26BYGR034W 384 nt0.16□□□□□ -2.38
LSM8P47093 TIM10YHR005C-A 282 nt0.16□□□□□ -2.38
LSM8P47093 RPC10YHR143W-A 213 nt0.16□□□□□ -2.38
LSM8P47093 YML009C-AYML009C-A 327 nt0.16□□□□□ -2.38
LSM8P47093 YMR013C-AYMR013C-A 150 nt0.16□□□□□ -2.38
LSM8P47093 YBR071WYBR071W 636 nt0.16□□□□□ -2.38
LSM8P47093 BEM3YPL115C 3387 nt0.15□□□□□ -2.38
LSM8P47093 NPR2YEL062W 1848 nt0.15□□□□□ -2.38
LSM8P47093 RSM27YGR215W 333 nt0.15□□□□□ -2.39
LSM8P47093 LIN1YHR156C 1023 nt0.15□□□□□ -2.39
LSM8P47093 PAM16YJL104W 450 nt0.15□□□□□ -2.39
LSM8P47093 TMA22YJR014W 597 nt0.15□□□□□ -2.39
LSM8P47093 YCK3YER123W 1575 nt0.15□□□□□ -2.39
LSM8P47093 FMP27YLR454W 7887 nt0.14□□□□□ -2.39
LSM8P47093 YEL030C-AYEL030C-A 315 nt0.14□□□□□ -2.39
LSM8P47093 YIL142C-AYIL142C-A 333 nt0.14□□□□□ -2.39
LSM8P47093 YLL032CYLL032C 2478 nt0.14□□□□□ -2.39
LSM8P47093 NOP9YJL010C 2001 nt0.13□□□□□ -2.39
LSM8P47093 PAU12YGR294W 363 nt0.13□□□□□ -2.39
LSM8P47093 YNL146C-AYNL146C-A 195 nt0.13□□□□□ -2.39
LSM8P47093 YOR282WYOR282W 321 nt0.13□□□□□ -2.39
LSM8P47093 TRS65YGR166W 1683 nt0.13□□□□□ -2.39
LSM8P47093 UTP20YBL004W 7482 nt0.13□□□□□ -2.39
LSM8P47093 YER087C-AYER087C-A 552 nt0.12□□□□□ -2.39
LSM8P47093 TMA10YLR327C 261 nt0.12□□□□□ -2.39
LSM8P47093 YBL062WYBL062W 381 nt0.12□□□□□ -2.39
LSM8P47093 PPN1YDR452W 2025 nt0.11□□□□□ -2.39
LSM8P47093 NPC2YDL046W 522 nt0.11□□□□□ -2.39
LSM8P47093 URM1YIL008W 300 nt0.11□□□□□ -2.39
LSM8P47093 MRPL31YKL138C 396 nt0.11□□□□□ -2.39
LSM8P47093 YLR412C-AYLR412C-A 207 nt0.11□□□□□ -2.39
LSM8P47093 RPL32YBL092W 393 nt0.11□□□□□ -2.39
LSM8P47093 BI4Q0120 1917 nt0.11□□□□□ -2.39
LSM8P47093 BUD26YDR241W 288 nt0.1□□□□□ -2.39
LSM8P47093 RPL9AYGL147C 576 nt0.1□□□□□ -2.39
LSM8P47093 YLR217WYLR217W 324 nt0.1□□□□□ -2.39
LSM8P47093 LOA1YPR139C 903 nt0.1□□□□□ -2.39
LSM8P47093 COG4YPR105C 2586 nt0.09□□□□□ -2.39
LSM8P47093 YFR057WYFR057W 456 nt0.09□□□□□ -2.4
LSM8P47093 SPO11YHL022C 1197 nt0.09□□□□□ -2.4
LSM8P47093 YHL042WYHL042W 453 nt0.09□□□□□ -2.4
LSM8P47093 YOR218CYOR218C 420 nt0.09□□□□□ -2.4
LSM8P47093 YNL054W-BYNL054W-B 5250 nt0.09□□□□□ -2.4
LSM8P47093 YER023C-AYER023C-A 213 nt0.08□□□□□ -2.4
LSM8P47093 YER138W-AYER138W-A 105 nt0.08□□□□□ -2.4
LSM8P47093 TAD1YGL243W 1203 nt0.08□□□□□ -2.4
LSM8P47093 YLR146W-AYLR146W-A 189 nt0.08□□□□□ -2.4
LSM8P47093 YLR252WYLR252W 306 nt0.08□□□□□ -2.4
LSM8P47093 YDR344CYDR344C 444 nt0.07□□□□□ -2.4
LSM8P47093 YER076W-AYER076W-A 348 nt0.07□□□□□ -2.4
LSM8P47093 YER188C-AYER188C-A 300 nt0.07□□□□□ -2.4
LSM8P47093 YOL013W-AYOL013W-A 192 nt0.07□□□□□ -2.4
LSM8P47093 YJR003CYJR003C 1560 nt0.06□□□□□ -2.4
LSM8P47093 YLR271WYLR271W 825 nt0.06□□□□□ -2.4
LSM8P47093 UBC7YMR022W 498 nt0.06□□□□□ -2.4
LSM8P47093 RFX1YLR176C 2436 nt0.06□□□□□ -2.4
LSM8P47093 YGL015CYGL015C 393 nt0.05□□□□□ -2.4
LSM8P47093 YPR096CYPR096C 303 nt0.05□□□□□ -2.4
LSM8P47093 ESP1YGR098C 4893 nt0.04□□□□□ -2.4
LSM8P47093 CWC23YGL128C 852 nt0.04□□□□□ -2.4
LSM8P47093 RTT102YGR275W 474 nt0.04□□□□□ -2.4
LSM8P47093 YJL127W-AYJL127W-A 117 nt0.04□□□□□ -2.4
LSM8P47093 AFR1YDR085C 1863 nt0.03□□□□□ -2.4
LSM8P47093 PET111YMR257C 2403 nt0.03□□□□□ -2.4
LSM8P47093 GPG1YGL121C 381 nt0.03□□□□□ -2.4
LSM8P47093 YJR079WYJR079W 330 nt0.03□□□□□ -2.4
LSM8P47093 RPL26AYLR344W 384 nt0.03□□□□□ -2.4
LSM8P47093 BSC3YLR465C 309 nt0.03□□□□□ -2.4
LSM8P47093 VAM3YOR106W 852 nt0.03□□□□□ -2.4
LSM8P47093 CSM4YPL200W 471 nt0.03□□□□□ -2.4
LSM8P47093 SHE9YDR393W 1371 nt0.03□□□□□ -2.4
LSM8P47093 YOR108C-AYOR108C-A 210 nt0.02□□□□□ -2.41
LSM8P47093 snR5snR5 204 nt0.01□□□□□ -2.41
LSM8P47093 SDS22YKL193C 1017 nt0.01□□□□□ -2.41
LSM8P47093 CDC33YOL139C 642 nt0.01□□□□□ -2.41
LSM8P47093 OST1YJL002C 1431 nt0.01□□□□□ -2.41
LSM8P47093 FYV10YIL097W 1551 nt0.01□□□□□ -2.41
LSM8P47093 ZIP2YGL249W 2115 nt0□□□□□ -2.41
LSM8P47093 BIG1YHR101C 1008 nt0□□□□□ -2.41
LSM8P47093 IQG1YPL242C 4488 nt0□□□□□ -2.41
LSM8P47093 VIK1YPL253C 1944 nt-0.01□□□□□ -2.41
Retrieved 100 of 7,029 protein–RNA pairs in 116 ms