Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HTR3AP46098 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HTR3AP46098 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
HTR3AP46098 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HTR3AP46098 FP700111.2-201ENST00000619190 1892 ntBASIC18.58■□□□□ 0.56
HTR3AP46098 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HTR3AP46098 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HTR3AP46098 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
HTR3AP46098 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.58■□□□□ 0.56
HTR3AP46098 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HTR3AP46098 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.57■□□□□ 0.56
HTR3AP46098 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HTR3AP46098 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.57■□□□□ 0.56
HTR3AP46098 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.57■□□□□ 0.56
HTR3AP46098 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HTR3AP46098 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HTR3AP46098 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HTR3AP46098 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HTR3AP46098 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.57■□□□□ 0.56
HTR3AP46098 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HTR3AP46098 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.57■□□□□ 0.56
HTR3AP46098 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HTR3AP46098 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
HTR3AP46098 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HTR3AP46098 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
HTR3AP46098 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.57■□□□□ 0.56
HTR3AP46098 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.57■□□□□ 0.56
HTR3AP46098 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.57■□□□□ 0.56
HTR3AP46098 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
HTR3AP46098 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HTR3AP46098 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HTR3AP46098 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HTR3AP46098 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.57■□□□□ 0.56
HTR3AP46098 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
HTR3AP46098 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.57■□□□□ 0.56
HTR3AP46098 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HTR3AP46098 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
HTR3AP46098 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.56■□□□□ 0.56
HTR3AP46098 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HTR3AP46098 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HTR3AP46098 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HTR3AP46098 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
HTR3AP46098 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
HTR3AP46098 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
HTR3AP46098 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
HTR3AP46098 CNN2P6-201ENST00000439038 900 ntBASIC18.56■□□□□ 0.56
HTR3AP46098 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.56■□□□□ 0.56
HTR3AP46098 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.56■□□□□ 0.56
HTR3AP46098 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.56■□□□□ 0.56
HTR3AP46098 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.56■□□□□ 0.56
HTR3AP46098 AC008694.1-202ENST00000636953 945 ntBASIC18.56■□□□□ 0.56
HTR3AP46098 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
HTR3AP46098 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.56■□□□□ 0.56
HTR3AP46098 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HTR3AP46098 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.56■□□□□ 0.56
HTR3AP46098 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HTR3AP46098 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
HTR3AP46098 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HTR3AP46098 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
HTR3AP46098 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
HTR3AP46098 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HTR3AP46098 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HTR3AP46098 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HTR3AP46098 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HTR3AP46098 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.55■□□□□ 0.56
HTR3AP46098 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HTR3AP46098 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
HTR3AP46098 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HTR3AP46098 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HTR3AP46098 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HTR3AP46098 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
HTR3AP46098 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
HTR3AP46098 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
HTR3AP46098 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.55■□□□□ 0.56
HTR3AP46098 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.55■□□□□ 0.56
HTR3AP46098 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.55■□□□□ 0.56
HTR3AP46098 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.55■□□□□ 0.56
HTR3AP46098 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HTR3AP46098 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.55■□□□□ 0.56
HTR3AP46098 AC069236.1-201ENST00000604339 616 ntBASIC18.55■□□□□ 0.56
HTR3AP46098 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HTR3AP46098 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.55■□□□□ 0.56
HTR3AP46098 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.55■□□□□ 0.56
HTR3AP46098 AC068338.2-201ENST00000563278 1430 ntBASIC18.55■□□□□ 0.56
HTR3AP46098 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HTR3AP46098 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HTR3AP46098 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.55■□□□□ 0.56
HTR3AP46098 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HTR3AP46098 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HTR3AP46098 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HTR3AP46098 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HTR3AP46098 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.54■□□□□ 0.56
HTR3AP46098 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HTR3AP46098 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HTR3AP46098 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.54■□□□□ 0.56
HTR3AP46098 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.54■□□□□ 0.56
HTR3AP46098 RARRES2P4-201ENST00000514074 484 ntBASIC18.54■□□□□ 0.56
HTR3AP46098 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.54■□□□□ 0.56
HTR3AP46098 AC100791.3-201ENST00000617619 330 ntBASIC18.54■□□□□ 0.56
HTR3AP46098 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms