Protein–RNA interactions for Protein: P40048

PTP3, Tyrosine-protein phosphatase 3, yeastyeast

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PTP3P40048 KAP114YGL241W 3015 nt4.37□□□□□ -1.71
PTP3P40048 NAB6YML117W 3405 nt4.37□□□□□ -1.71
PTP3P40048 YHR073W-AYHR073W-A 177 nt4.37□□□□□ -1.71
PTP3P40048 RPL42AYNL162W 321 nt4.37□□□□□ -1.71
PTP3P40048 ROM1YGR070W 3468 nt4.37□□□□□ -1.71
PTP3P40048 IRC8YJL051W 2469 nt4.37□□□□□ -1.71
PTP3P40048 YNL018CYNL018C 1839 nt4.37□□□□□ -1.71
PTP3P40048 BUB1YGR188C 3066 nt4.37□□□□□ -1.71
PTP3P40048 MIT1YEL007W 2001 nt4.36□□□□□ -1.71
PTP3P40048 GAL11YOL051W 3246 nt4.36□□□□□ -1.71
PTP3P40048 SBE22YHR103W 2559 nt4.36□□□□□ -1.71
PTP3P40048 SWI5YDR146C 2130 nt4.36□□□□□ -1.71
PTP3P40048 UTP8YGR128C 2142 nt4.36□□□□□ -1.71
PTP3P40048 TAE2YPL009C 3117 nt4.35□□□□□ -1.71
PTP3P40048 YCR038W-AYCR038W-A 126 nt4.35□□□□□ -1.71
PTP3P40048 SDC25YLL016W 3147 nt4.35□□□□□ -1.71
PTP3P40048 SPO22YIL073C 2928 nt4.35□□□□□ -1.71
PTP3P40048 RAD34YDR314C 2079 nt4.34□□□□□ -1.71
PTP3P40048 FLO5YHR211W 3228 nt4.34□□□□□ -1.71
PTP3P40048 YNL266WYNL266W 420 nt4.34□□□□□ -1.71
PTP3P40048 YOR108C-AYOR108C-A 210 nt4.34□□□□□ -1.71
PTP3P40048 RGR1YLR071C 3249 nt4.34□□□□□ -1.72
PTP3P40048 IFH1YLR223C 3258 nt4.34□□□□□ -1.72
PTP3P40048 RPA135YPR010C 3612 nt4.33□□□□□ -1.72
PTP3P40048 PMC1YGL006W 3522 nt4.33□□□□□ -1.72
PTP3P40048 STB4YMR019W 2850 nt4.32□□□□□ -1.72
PTP3P40048 NAM7YMR080C 2916 nt4.32□□□□□ -1.72
PTP3P40048 SPT23YKL020C 3249 nt4.32□□□□□ -1.72
PTP3P40048 VPS16YPL045W 2397 nt4.32□□□□□ -1.72
PTP3P40048 SET2YJL168C 2202 nt4.31□□□□□ -1.72
PTP3P40048 DUG2YBR281C 2637 nt4.3□□□□□ -1.72
PTP3P40048 YIL002W-AYIL002W-A 210 nt4.3□□□□□ -1.72
PTP3P40048 TFC1YBR123C 1950 nt4.3□□□□□ -1.72
PTP3P40048 YLR278CYLR278C 4026 nt4.29□□□□□ -1.72
PTP3P40048 TFC4YGR047C 3078 nt4.29□□□□□ -1.72
PTP3P40048 INP53YOR109W 3324 nt4.29□□□□□ -1.72
PTP3P40048 YHR131W-AYHR131W-A 246 nt4.29□□□□□ -1.72
PTP3P40048 RRP6YOR001W 2202 nt4.29□□□□□ -1.72
PTP3P40048 CDC53YDL132W 2448 nt4.29□□□□□ -1.72
PTP3P40048 VHC1YBR235W 3363 nt4.28□□□□□ -1.72
PTP3P40048 snR53snR53 91 nt4.27□□□□□ -1.73
PTP3P40048 PDR8YLR266C 2106 nt4.26□□□□□ -1.73
PTP3P40048 MGM1YOR211C 2646 nt4.25□□□□□ -1.73
PTP3P40048 QCR9YGR183C 201 nt4.25□□□□□ -1.73
PTP3P40048 YKR075W-AYKR075W-A 270 nt4.25□□□□□ -1.73
PTP3P40048 YMR242W-AYMR242W-A 90 nt4.25□□□□□ -1.73
PTP3P40048 GCV2YMR189W 3105 nt4.24□□□□□ -1.73
PTP3P40048 YGL182CYGL182C 324 nt4.24□□□□□ -1.73
PTP3P40048 RSE1YML049C 4086 nt4.24□□□□□ -1.73
PTP3P40048 SSN2YDR443C 4263 nt4.24□□□□□ -1.73
PTP3P40048 SSM4YIL030C 3960 nt4.23□□□□□ -1.73
PTP3P40048 MYO3YKL129C 3819 nt4.23□□□□□ -1.73
PTP3P40048 MAK21YDR060W 3078 nt4.23□□□□□ -1.73
PTP3P40048 STB6YKL072W 2301 nt4.23□□□□□ -1.73
PTP3P40048 APE2YKL157W 2859 nt4.22□□□□□ -1.73
PTP3P40048 YLL054CYLL054C 2532 nt4.22□□□□□ -1.73
PTP3P40048 PTP2YOR208W 2253 nt4.22□□□□□ -1.73
PTP3P40048 SPT4YGR063C 309 nt4.22□□□□□ -1.73
PTP3P40048 TTI1YKL033W 3117 nt4.22□□□□□ -1.73
PTP3P40048 SNF2YOR290C 5112 nt4.21□□□□□ -1.74
PTP3P40048 YJL026C-AYJL026C-A 222 nt4.21□□□□□ -1.74
PTP3P40048 VPS8YAL002W 3825 nt4.2□□□□□ -1.74
PTP3P40048 STE6YKL209C 3873 nt4.2□□□□□ -1.74
PTP3P40048 YDR034C-AYDR034C-A 177 nt4.2□□□□□ -1.74
PTP3P40048 ACB1YGR037C 264 nt4.2□□□□□ -1.74
PTP3P40048 YLR154C-HYLR154C-H 132 nt4.2□□□□□ -1.74
PTP3P40048 YLR156C-AYLR156C-A 132 nt4.2□□□□□ -1.74
PTP3P40048 YLR157C-CYLR157C-C 132 nt4.2□□□□□ -1.74
PTP3P40048 YLR159C-AYLR159C-A 132 nt4.2□□□□□ -1.74
PTP3P40048 VAC7YNL054W 3498 nt4.2□□□□□ -1.74
PTP3P40048 FIR1YER032W 2631 nt4.19□□□□□ -1.74
PTP3P40048 MDR1YGR100W 2853 nt4.19□□□□□ -1.74
PTP3P40048 YDR354C-AYDR354C-A 144 nt4.19□□□□□ -1.74
PTP3P40048 PAU8YAL068C 363 nt4.19□□□□□ -1.74
PTP3P40048 PAU18YLL064C 363 nt4.19□□□□□ -1.74
PTP3P40048 PAU6YNR076W 363 nt4.19□□□□□ -1.74
PTP3P40048 PAU20YOL161C 363 nt4.19□□□□□ -1.74
PTP3P40048 RPO21YDL140C 5202 nt4.19□□□□□ -1.74
PTP3P40048 YJR039WYJR039W 3366 nt4.18□□□□□ -1.74
PTP3P40048 ECM21YBL101C 3354 nt4.18□□□□□ -1.74
PTP3P40048 MAD1YGL086W 2250 nt4.18□□□□□ -1.74
PTP3P40048 KTI11YBL071W-A 249 nt4.18□□□□□ -1.74
PTP3P40048 YME2YMR302C 2553 nt4.18□□□□□ -1.74
PTP3P40048 YMR317WYMR317W 3423 nt4.18□□□□□ -1.74
PTP3P40048 DAN4YJR151C 3486 nt4.17□□□□□ -1.74
PTP3P40048 SNC1YAL030W 354 nt4.17□□□□□ -1.74
PTP3P40048 snR39BsnR39B 96 nt4.17□□□□□ -1.74
PTP3P40048 SIN3YOL004W 4611 nt4.17□□□□□ -1.74
PTP3P40048 SWI1YPL016W 3945 nt4.17□□□□□ -1.74
PTP3P40048 MET5YJR137C 4329 nt4.16□□□□□ -1.74
PTP3P40048 RRP12YPL012W 3687 nt4.16□□□□□ -1.74
PTP3P40048 YHR080CYHR080C 4038 nt4.16□□□□□ -1.74
PTP3P40048 DNA2YHR164C 4569 nt4.16□□□□□ -1.74
PTP3P40048 YCF1YDR135C 4548 nt4.15□□□□□ -1.75
PTP3P40048 REC8YPR007C 2043 nt4.15□□□□□ -1.75
PTP3P40048 SAS3YBL052C 2496 nt4.15□□□□□ -1.75
PTP3P40048 HMI1YOL095C 2121 nt4.15□□□□□ -1.75
PTP3P40048 ENV11YGR071C 2583 nt4.14□□□□□ -1.75
PTP3P40048 SMC3YJL074C 3693 nt4.14□□□□□ -1.75
PTP3P40048 VTC3YPL019C 2508 nt4.14□□□□□ -1.75
Retrieved 100 of 7,029 protein–RNA pairs in 15 ms