Protein–RNA interactions for Protein: P38931

SSN2, Mediator of RNA polymerase II transcription subunit 13, yeastyeast

Predictions only

Length 1,420 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN2P38931 YGR164WYGR164W 336 nt0□□□□□ -2.41
SSN2P38931 RPL42BYHR141C 321 nt0□□□□□ -2.41
SSN2P38931 RPL42AYNL162W 321 nt0□□□□□ -2.41
SSN2P38931 YOR169CYOR169C 465 nt0□□□□□ -2.41
SSN2P38931 snR24snR24 89 nt0□□□□□ -2.41
SSN2P38931 SRP14YDL092W 441 nt-0.01□□□□□ -2.41
SSN2P38931 POP6YGR030C 477 nt-0.01□□□□□ -2.41
SSN2P38931 PET20YPL159C 762 nt-0.01□□□□□ -2.41
SSN2P38931 YPL060C-AYPL060C-A 3315 nt-0.02□□□□□ -2.41
SSN2P38931 SBH1YER087C-B 249 nt-0.02□□□□□ -2.41
SSN2P38931 YIL134C-AYIL134C-A 204 nt-0.02□□□□□ -2.41
SSN2P38931 YOR053WYOR053W 342 nt-0.02□□□□□ -2.41
SSN2P38931 YPR153WYPR153W 423 nt-0.02□□□□□ -2.41
SSN2P38931 URB1YKL014C 5295 nt-0.02□□□□□ -2.41
SSN2P38931 SCW11YGL028C 1629 nt-0.02□□□□□ -2.41
SSN2P38931 LOA1YPR139C 903 nt-0.03□□□□□ -2.41
SSN2P38931 YPR172WYPR172W 603 nt-0.03□□□□□ -2.41
SSN2P38931 KAR3YPR141C 2190 nt-0.03□□□□□ -2.41
SSN2P38931 REF2YDR195W 1602 nt-0.04□□□□□ -2.42
SSN2P38931 YOR282WYOR282W 321 nt-0.04□□□□□ -2.42
SSN2P38931 YOP1YPR028W 543 nt-0.04□□□□□ -2.42
SSN2P38931 SWI5YDR146C 2130 nt-0.04□□□□□ -2.42
SSN2P38931 RPL26BYGR034W 384 nt-0.04□□□□□ -2.42
SSN2P38931 RPS16AYMR143W 432 nt-0.04□□□□□ -2.42
SSN2P38931 YNL171CYNL171C 369 nt-0.04□□□□□ -2.42
SSN2P38931 MMS4YBR098W 2076 nt-0.05□□□□□ -2.42
SSN2P38931 NPR2YEL062W 1848 nt-0.05□□□□□ -2.42
SSN2P38931 LSO2YGR169C-A 279 nt-0.05□□□□□ -2.42
SSN2P38931 NUP82YJL061W 2142 nt-0.05□□□□□ -2.42
SSN2P38931 TIM8YJR135W-A 264 nt-0.05□□□□□ -2.42
SSN2P38931 YOR108C-AYOR108C-A 210 nt-0.05□□□□□ -2.42
SSN2P38931 snR46snR46 197 nt-0.05□□□□□ -2.42
SSN2P38931 ZIP1YDR285W 2628 nt-0.06□□□□□ -2.42
SSN2P38931 RPL29YFR032C-A 180 nt-0.06□□□□□ -2.42
SSN2P38931 YHR028W-AYHR028W-A 321 nt-0.06□□□□□ -2.42
SSN2P38931 COX12YLR038C 252 nt-0.06□□□□□ -2.42
SSN2P38931 YOL118CYOL118C 309 nt-0.06□□□□□ -2.42
SSN2P38931 KAR1YNL188W 1302 nt-0.07□□□□□ -2.42
SSN2P38931 PRP5YBR237W 2550 nt-0.07□□□□□ -2.42
SSN2P38931 YEL010WYEL010W 351 nt-0.07□□□□□ -2.42
SSN2P38931 snR190snR190 190 nt-0.07□□□□□ -2.42
SSN2P38931 MLP1YKR095W 5628 nt-0.08□□□□□ -2.42
SSN2P38931 YDL068WYDL068W 330 nt-0.08□□□□□ -2.42
SSN2P38931 YGL258W-AYGL258W-A 234 nt-0.08□□□□□ -2.42
SSN2P38931 YGR042WYGR042W 816 nt-0.08□□□□□ -2.42
SSN2P38931 YPL080CYPL080C 327 nt-0.08□□□□□ -2.42
SSN2P38931 NOP9YJL010C 2001 nt-0.08□□□□□ -2.42
SSN2P38931 VIK1YPL253C 1944 nt-0.09□□□□□ -2.42
SSN2P38931 PMP1YCR024C-A 123 nt-0.09□□□□□ -2.42
SSN2P38931 MET32YDR253C 576 nt-0.09□□□□□ -2.42
SSN2P38931 RCN2YOR220W 798 nt-0.09□□□□□ -2.42
SSN2P38931 AI5_ALPHAQ0070 1893 nt-0.1□□□□□ -2.43
SSN2P38931 LCD1YDR499W 2244 nt-0.1□□□□□ -2.43
SSN2P38931 YHR139C-AYHR139C-A 312 nt-0.1□□□□□ -2.43
SSN2P38931 YNR077CYNR077C 255 nt-0.1□□□□□ -2.43
SSN2P38931 YCR024C-BYCR024C-B 267 nt-0.11□□□□□ -2.43
SSN2P38931 YGL042CYGL042C 306 nt-0.11□□□□□ -2.43
SSN2P38931 RSM18YER050C 417 nt-0.12□□□□□ -2.43
SSN2P38931 YJL086CYJL086C 369 nt-0.12□□□□□ -2.43
SSN2P38931 PET111YMR257C 2403 nt-0.12□□□□□ -2.43
SSN2P38931 INP2YMR163C 2118 nt-0.12□□□□□ -2.43
SSN2P38931 THG1YGR024C 714 nt-0.13□□□□□ -2.43
SSN2P38931 YDR114CYDR114C 303 nt-0.13□□□□□ -2.43
SSN2P38931 MMS21YEL019C 804 nt-0.13□□□□□ -2.43
SSN2P38931 BIG1YHR101C 1008 nt-0.13□□□□□ -2.43
SSN2P38931 ARV1YLR242C 966 nt-0.13□□□□□ -2.43
SSN2P38931 BLS1YLR408C 369 nt-0.13□□□□□ -2.43
SSN2P38931 RPS7BYNL096C 573 nt-0.13□□□□□ -2.43
SSN2P38931 RPL26AYLR344W 384 nt-0.14□□□□□ -2.43
SSN2P38931 RRT1YBL048W 312 nt-0.14□□□□□ -2.43
SSN2P38931 HNT1YDL125C 477 nt-0.15□□□□□ -2.43
SSN2P38931 snR84snR84 550 nt-0.15□□□□□ -2.43
SSN2P38931 NTF2YER009W 378 nt-0.15□□□□□ -2.43
SSN2P38931 YJL127W-AYJL127W-A 117 nt-0.15□□□□□ -2.43
SSN2P38931 HOT13YKL084W 351 nt-0.15□□□□□ -2.43
SSN2P38931 UPS1YLR193C 528 nt-0.15□□□□□ -2.43
SSN2P38931 IPI3YNL182C 1668 nt-0.16□□□□□ -2.43
SSN2P38931 RPL35AYDL191W 363 nt-0.16□□□□□ -2.44
SSN2P38931 YDR182W-AYDR182W-A 204 nt-0.16□□□□□ -2.44
SSN2P38931 VMA21YGR105W 234 nt-0.16□□□□□ -2.44
SSN2P38931 YLR252WYLR252W 306 nt-0.16□□□□□ -2.44
SSN2P38931 YDL152WYDL152W 366 nt-0.17□□□□□ -2.44
SSN2P38931 SSS1YDR086C 243 nt-0.17□□□□□ -2.44
SSN2P38931 SPO11YHL022C 1197 nt-0.17□□□□□ -2.44
SSN2P38931 YHL042WYHL042W 453 nt-0.17□□□□□ -2.44
SSN2P38931 CMS1YLR003C 876 nt-0.17□□□□□ -2.44
SSN2P38931 SPO23YBR250W 1572 nt-0.17□□□□□ -2.44
SSN2P38931 GSP1YLR293C 660 nt-0.19□□□□□ -2.44
SSN2P38931 RPB10YOR210W 213 nt-0.19□□□□□ -2.44
SSN2P38931 ATP20YPR020W 348 nt-0.19□□□□□ -2.44
SSN2P38931 FYV10YIL097W 1551 nt-0.2□□□□□ -2.44
SSN2P38931 PRP42YDR235W 1635 nt-0.2□□□□□ -2.44
SSN2P38931 RPC10YHR143W-A 213 nt-0.21□□□□□ -2.44
SSN2P38931 VPS63YLR261C 327 nt-0.21□□□□□ -2.44
SSN2P38931 RPS27AYKL156W 249 nt-0.21□□□□□ -2.44
SSN2P38931 RCO1YMR075W 2055 nt-0.23□□□□□ -2.45
SSN2P38931 YER038W-AYER038W-A 381 nt-0.25□□□□□ -2.45
SSN2P38931 BSC3YLR465C 309 nt-0.25□□□□□ -2.45
SSN2P38931 YMR158C-AYMR158C-A 138 nt-0.25□□□□□ -2.45
SSN2P38931 SUS1YBR111W-A 291 nt-0.25□□□□□ -2.45
Retrieved 100 of 7,029 protein–RNA pairs in 421.9 ms