Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRT20P35900 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.11■□□□□ 0.65
KRT20P35900 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KRT20P35900 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KRT20P35900 AC231657.2-201ENST00000624556 255 ntBASIC19.11■□□□□ 0.65
KRT20P35900 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
KRT20P35900 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRT20P35900 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.11■□□□□ 0.65
KRT20P35900 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRT20P35900 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRT20P35900 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
KRT20P35900 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KRT20P35900 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT20P35900 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
KRT20P35900 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT20P35900 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT20P35900 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT20P35900 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.1■□□□□ 0.65
KRT20P35900 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.1■□□□□ 0.65
KRT20P35900 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT20P35900 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.1■□□□□ 0.65
KRT20P35900 AC080038.1-201ENST00000611274 1154 ntBASIC19.1■□□□□ 0.65
KRT20P35900 AC092437.1-201ENST00000624794 1048 ntBASIC19.1■□□□□ 0.65
KRT20P35900 AC027702.1-201ENST00000563810 1770 ntBASIC19.1■□□□□ 0.65
KRT20P35900 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.1■□□□□ 0.65
KRT20P35900 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT20P35900 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
KRT20P35900 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT20P35900 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT20P35900 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT20P35900 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KRT20P35900 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
KRT20P35900 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.09■□□□□ 0.65
KRT20P35900 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KRT20P35900 AC007322.1-201ENST00000426983 750 ntBASIC19.09■□□□□ 0.65
KRT20P35900 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
KRT20P35900 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.09■□□□□ 0.65
KRT20P35900 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.09■□□□□ 0.65
KRT20P35900 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
KRT20P35900 AL591742.1-201ENST00000604433 565 ntBASIC19.09■□□□□ 0.65
KRT20P35900 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.09■□□□□ 0.65
KRT20P35900 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
KRT20P35900 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
KRT20P35900 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
KRT20P35900 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
KRT20P35900 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
KRT20P35900 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
KRT20P35900 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.09■□□□□ 0.65
KRT20P35900 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KRT20P35900 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.09■□□□□ 0.65
KRT20P35900 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KRT20P35900 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KRT20P35900 AC116050.2-201ENST00000612102 1779 ntBASIC19.09■□□□□ 0.65
KRT20P35900 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
KRT20P35900 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
KRT20P35900 AC121338.2-201ENST00000622535 1744 ntBASIC19.08■□□□□ 0.65
KRT20P35900 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
KRT20P35900 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.08■□□□□ 0.65
KRT20P35900 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
KRT20P35900 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
KRT20P35900 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
KRT20P35900 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.08■□□□□ 0.64
KRT20P35900 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
KRT20P35900 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.08■□□□□ 0.64
KRT20P35900 DUX4L16-201ENST00000555130 1264 ntBASIC19.08■□□□□ 0.64
KRT20P35900 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.08■□□□□ 0.64
KRT20P35900 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
KRT20P35900 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.64
KRT20P35900 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
KRT20P35900 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
KRT20P35900 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.08■□□□□ 0.64
KRT20P35900 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT20P35900 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
KRT20P35900 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT20P35900 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.07■□□□□ 0.64
KRT20P35900 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT20P35900 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT20P35900 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
KRT20P35900 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT20P35900 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
KRT20P35900 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.07■□□□□ 0.64
KRT20P35900 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT20P35900 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.07■□□□□ 0.64
KRT20P35900 AC091799.1-201ENST00000422823 811 ntBASIC19.07■□□□□ 0.64
KRT20P35900 AC007322.3-201ENST00000426526 701 ntBASIC19.07■□□□□ 0.64
KRT20P35900 AC007322.4-201ENST00000509611 723 ntBASIC19.07■□□□□ 0.64
KRT20P35900 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.07■□□□□ 0.64
KRT20P35900 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
KRT20P35900 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT20P35900 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT20P35900 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.07■□□□□ 0.64
KRT20P35900 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.07■□□□□ 0.64
KRT20P35900 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT20P35900 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
KRT20P35900 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT20P35900 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT20P35900 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.07■□□□□ 0.64
KRT20P35900 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT20P35900 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KRT20P35900 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms