Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EPHA3P29320 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EPHA3P29320 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
EPHA3P29320 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EPHA3P29320 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EPHA3P29320 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
EPHA3P29320 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
EPHA3P29320 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.6■□□□□ 0.73
EPHA3P29320 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EPHA3P29320 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.6■□□□□ 0.73
EPHA3P29320 AL358852.1-201ENST00000623174 1268 ntBASIC19.6■□□□□ 0.73
EPHA3P29320 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
EPHA3P29320 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EPHA3P29320 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
EPHA3P29320 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.6■□□□□ 0.73
EPHA3P29320 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EPHA3P29320 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.6■□□□□ 0.73
EPHA3P29320 KRT8P36-201ENST00000489121 1440 ntBASIC19.59■□□□□ 0.73
EPHA3P29320 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.59■□□□□ 0.73
EPHA3P29320 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
EPHA3P29320 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
EPHA3P29320 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
EPHA3P29320 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.59■□□□□ 0.73
EPHA3P29320 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
EPHA3P29320 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.59■□□□□ 0.73
EPHA3P29320 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
EPHA3P29320 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.59■□□□□ 0.73
EPHA3P29320 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
EPHA3P29320 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.59■□□□□ 0.73
EPHA3P29320 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.59■□□□□ 0.73
EPHA3P29320 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
EPHA3P29320 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.59■□□□□ 0.73
EPHA3P29320 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
EPHA3P29320 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.59■□□□□ 0.73
EPHA3P29320 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
EPHA3P29320 TMEM179-206ENST00000616017 1645 ntBASIC19.58■□□□□ 0.73
EPHA3P29320 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
EPHA3P29320 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
EPHA3P29320 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
EPHA3P29320 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
EPHA3P29320 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.58■□□□□ 0.72
EPHA3P29320 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.58■□□□□ 0.72
EPHA3P29320 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
EPHA3P29320 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
EPHA3P29320 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.58■□□□□ 0.72
EPHA3P29320 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.58■□□□□ 0.72
EPHA3P29320 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.58■□□□□ 0.72
EPHA3P29320 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
EPHA3P29320 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.58■□□□□ 0.72
EPHA3P29320 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.58■□□□□ 0.72
EPHA3P29320 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
EPHA3P29320 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
EPHA3P29320 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
EPHA3P29320 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
EPHA3P29320 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
EPHA3P29320 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
EPHA3P29320 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
EPHA3P29320 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
EPHA3P29320 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
EPHA3P29320 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
EPHA3P29320 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.57■□□□□ 0.72
EPHA3P29320 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
EPHA3P29320 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
EPHA3P29320 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
EPHA3P29320 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.57■□□□□ 0.72
EPHA3P29320 AC005332.7-201ENST00000614046 2005 ntBASIC19.57■□□□□ 0.72
EPHA3P29320 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.57■□□□□ 0.72
EPHA3P29320 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.57■□□□□ 0.72
EPHA3P29320 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
EPHA3P29320 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
EPHA3P29320 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.57■□□□□ 0.72
EPHA3P29320 BX119927.1-201ENST00000636596 1552 ntBASIC19.57■□□□□ 0.72
EPHA3P29320 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.57■□□□□ 0.72
EPHA3P29320 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
EPHA3P29320 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
EPHA3P29320 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EPHA3P29320 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EPHA3P29320 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.56■□□□□ 0.72
EPHA3P29320 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.56■□□□□ 0.72
EPHA3P29320 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EPHA3P29320 IRS3P-201ENST00000223076 1006 ntBASIC19.56■□□□□ 0.72
EPHA3P29320 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.56■□□□□ 0.72
EPHA3P29320 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
EPHA3P29320 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EPHA3P29320 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
EPHA3P29320 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.56■□□□□ 0.72
EPHA3P29320 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EPHA3P29320 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.56■□□□□ 0.72
EPHA3P29320 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EPHA3P29320 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
EPHA3P29320 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.56■□□□□ 0.72
EPHA3P29320 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
EPHA3P29320 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
EPHA3P29320 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
EPHA3P29320 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.56■□□□□ 0.72
EPHA3P29320 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EPHA3P29320 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EPHA3P29320 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.55■□□□□ 0.72
EPHA3P29320 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.55■□□□□ 0.72
EPHA3P29320 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 211.5 ms