Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN3P26045 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.61■□□□□ 0.89
PTPN3P26045 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN3P26045 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN3P26045 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.61■□□□□ 0.89
PTPN3P26045 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.61■□□□□ 0.89
PTPN3P26045 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN3P26045 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTPN3P26045 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTPN3P26045 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.6■□□□□ 0.89
PTPN3P26045 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.6■□□□□ 0.89
PTPN3P26045 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTPN3P26045 MIR663A-201ENST00000385250 93 ntBASIC20.6■□□□□ 0.89
PTPN3P26045 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.6■□□□□ 0.89
PTPN3P26045 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.6■□□□□ 0.89
PTPN3P26045 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTPN3P26045 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTPN3P26045 PCDHAC2-203ENST00000615316 3011 ntBASIC20.6■□□□□ 0.89
PTPN3P26045 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.6■□□□□ 0.89
PTPN3P26045 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.6■□□□□ 0.89
PTPN3P26045 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.6■□□□□ 0.89
PTPN3P26045 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTPN3P26045 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTPN3P26045 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTPN3P26045 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.59■□□□□ 0.89
PTPN3P26045 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.59■□□□□ 0.89
PTPN3P26045 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTPN3P26045 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PTPN3P26045 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTPN3P26045 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTPN3P26045 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTPN3P26045 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTPN3P26045 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTPN3P26045 CROCCP5-201ENST00000436658 830 ntBASIC20.59■□□□□ 0.89
PTPN3P26045 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.59■□□□□ 0.89
PTPN3P26045 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
PTPN3P26045 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.59■□□□□ 0.89
PTPN3P26045 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
PTPN3P26045 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTPN3P26045 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.59■□□□□ 0.89
PTPN3P26045 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.59■□□□□ 0.89
PTPN3P26045 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.59■□□□□ 0.89
PTPN3P26045 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTPN3P26045 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTPN3P26045 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTPN3P26045 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
PTPN3P26045 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTPN3P26045 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTPN3P26045 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.58■□□□□ 0.89
PTPN3P26045 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
PTPN3P26045 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PTPN3P26045 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTPN3P26045 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTPN3P26045 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PTPN3P26045 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTPN3P26045 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.58■□□□□ 0.89
PTPN3P26045 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PTPN3P26045 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTPN3P26045 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
PTPN3P26045 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PTPN3P26045 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
PTPN3P26045 KRT17P1-201ENST00000399211 1546 ntBASIC20.58■□□□□ 0.88
PTPN3P26045 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.58■□□□□ 0.88
PTPN3P26045 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTPN3P26045 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PTPN3P26045 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PTPN3P26045 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.57■□□□□ 0.88
PTPN3P26045 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
PTPN3P26045 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PTPN3P26045 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.57■□□□□ 0.88
PTPN3P26045 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTPN3P26045 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTPN3P26045 TCF3P1-201ENST00000423021 1937 ntBASIC20.57■□□□□ 0.88
PTPN3P26045 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PTPN3P26045 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
PTPN3P26045 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN3P26045 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
PTPN3P26045 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN3P26045 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN3P26045 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
PTPN3P26045 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN3P26045 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN3P26045 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN3P26045 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN3P26045 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.56■□□□□ 0.88
PTPN3P26045 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN3P26045 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN3P26045 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN3P26045 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN3P26045 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN3P26045 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN3P26045 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN3P26045 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.55■□□□□ 0.88
PTPN3P26045 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
PTPN3P26045 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
PTPN3P26045 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTPN3P26045 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.55■□□□□ 0.88
PTPN3P26045 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PTPN3P26045 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PTPN3P26045 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms