Protein–RNA interactions for Protein: P18545

PDE6G, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma, humanhuman

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6GP18545 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PDE6GP18545 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PDE6GP18545 KRT18P24-201ENST00000344739 1156 ntBASIC12.51□□□□□ -0.41
PDE6GP18545 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC12.51□□□□□ -0.41
PDE6GP18545 AL499627.2-201ENST00000606283 725 ntBASIC12.51□□□□□ -0.41
PDE6GP18545 SNX5-217ENST00000606557 1087 ntBASIC12.51□□□□□ -0.41
PDE6GP18545 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
PDE6GP18545 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PDE6GP18545 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PDE6GP18545 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PDE6GP18545 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
PDE6GP18545 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
PDE6GP18545 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC12.51□□□□□ -0.41
PDE6GP18545 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PDE6GP18545 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC12.51□□□□□ -0.41
PDE6GP18545 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC12.51□□□□□ -0.41
PDE6GP18545 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
PDE6GP18545 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
PDE6GP18545 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6GP18545 POLI-202ENST00000406285 2030 ntTSL 2 BASIC12.5□□□□□ -0.41
PDE6GP18545 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6GP18545 LBX2-AS1-202ENST00000603175 2083 ntBASIC12.5□□□□□ -0.41
PDE6GP18545 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6GP18545 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6GP18545 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC12.5□□□□□ -0.41
PDE6GP18545 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC12.5□□□□□ -0.41
PDE6GP18545 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6GP18545 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC12.5□□□□□ -0.41
PDE6GP18545 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6GP18545 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6GP18545 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6GP18545 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
PDE6GP18545 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6GP18545 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6GP18545 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6GP18545 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6GP18545 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6GP18545 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6GP18545 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6GP18545 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6GP18545 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6GP18545 MTX2-204ENST00000443241 799 ntTSL 3 BASIC12.5□□□□□ -0.41
PDE6GP18545 AC016575.1-201ENST00000607026 382 ntBASIC12.5□□□□□ -0.41
PDE6GP18545 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6GP18545 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
PDE6GP18545 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6GP18545 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6GP18545 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6GP18545 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC12.5□□□□□ -0.41
PDE6GP18545 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6GP18545 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6GP18545 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC12.5□□□□□ -0.41
PDE6GP18545 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6GP18545 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6GP18545 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6GP18545 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6GP18545 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6GP18545 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6GP18545 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6GP18545 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6GP18545 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
PDE6GP18545 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6GP18545 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
PDE6GP18545 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
PDE6GP18545 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PDE6GP18545 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
PDE6GP18545 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PDE6GP18545 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PDE6GP18545 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PDE6GP18545 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
PDE6GP18545 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
PDE6GP18545 AC093484.2-201ENST00000580996 2166 ntBASIC12.49□□□□□ -0.41
PDE6GP18545 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PDE6GP18545 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC12.49□□□□□ -0.41
PDE6GP18545 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PDE6GP18545 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC12.49□□□□□ -0.41
PDE6GP18545 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PDE6GP18545 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PDE6GP18545 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PDE6GP18545 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PDE6GP18545 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC12.49□□□□□ -0.41
PDE6GP18545 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PDE6GP18545 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
PDE6GP18545 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
PDE6GP18545 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
PDE6GP18545 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
PDE6GP18545 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
PDE6GP18545 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
PDE6GP18545 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC12.49□□□□□ -0.41
PDE6GP18545 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC12.49□□□□□ -0.41
PDE6GP18545 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PDE6GP18545 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC12.49□□□□□ -0.41
PDE6GP18545 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
PDE6GP18545 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC12.49□□□□□ -0.41
PDE6GP18545 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
PDE6GP18545 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PDE6GP18545 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PDE6GP18545 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PDE6GP18545 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PDE6GP18545 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms