Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
VCLP18206 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VCLP18206 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.22■□□□□ 0.83
VCLP18206 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
VCLP18206 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
VCLP18206 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VCLP18206 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
VCLP18206 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
VCLP18206 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VCLP18206 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
VCLP18206 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
VCLP18206 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VCLP18206 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.21■□□□□ 0.83
VCLP18206 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VCLP18206 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VCLP18206 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
VCLP18206 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.21■□□□□ 0.83
VCLP18206 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.21■□□□□ 0.83
VCLP18206 GUSBP6-202ENST00000438529 1198 ntBASIC20.21■□□□□ 0.83
VCLP18206 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.21■□□□□ 0.83
VCLP18206 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.21■□□□□ 0.83
VCLP18206 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.21■□□□□ 0.83
VCLP18206 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.21■□□□□ 0.83
VCLP18206 MIR4758-201ENST00000577688 71 ntBASIC20.21■□□□□ 0.83
VCLP18206 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.21■□□□□ 0.83
VCLP18206 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
VCLP18206 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
VCLP18206 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
VCLP18206 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VCLP18206 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.21■□□□□ 0.83
VCLP18206 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
VCLP18206 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
VCLP18206 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VCLP18206 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.21■□□□□ 0.83
VCLP18206 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.21■□□□□ 0.83
VCLP18206 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.21■□□□□ 0.83
VCLP18206 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
VCLP18206 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
VCLP18206 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
VCLP18206 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.21■□□□□ 0.83
VCLP18206 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.2■□□□□ 0.82
VCLP18206 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VCLP18206 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
VCLP18206 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
VCLP18206 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VCLP18206 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
VCLP18206 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VCLP18206 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.2■□□□□ 0.82
VCLP18206 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
VCLP18206 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
VCLP18206 MCRIP2P1-201ENST00000394346 511 ntBASIC20.2■□□□□ 0.82
VCLP18206 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
VCLP18206 PGM5P4-201ENST00000421970 445 ntBASIC20.2■□□□□ 0.82
VCLP18206 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
VCLP18206 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.2■□□□□ 0.82
VCLP18206 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VCLP18206 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VCLP18206 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.19■□□□□ 0.82
VCLP18206 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.19■□□□□ 0.82
VCLP18206 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.19■□□□□ 0.82
VCLP18206 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
VCLP18206 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
VCLP18206 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
VCLP18206 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VCLP18206 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VCLP18206 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VCLP18206 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VCLP18206 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
VCLP18206 BX276092.2-201ENST00000417668 665 ntBASIC20.19■□□□□ 0.82
VCLP18206 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
VCLP18206 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.19■□□□□ 0.82
VCLP18206 AC142086.2-201ENST00000569753 217 ntBASIC20.19■□□□□ 0.82
VCLP18206 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.19■□□□□ 0.82
VCLP18206 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.19■□□□□ 0.82
VCLP18206 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
VCLP18206 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
VCLP18206 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VCLP18206 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VCLP18206 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VCLP18206 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VCLP18206 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VCLP18206 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
VCLP18206 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VCLP18206 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
VCLP18206 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.18■□□□□ 0.82
VCLP18206 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
VCLP18206 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
VCLP18206 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VCLP18206 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VCLP18206 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
VCLP18206 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
VCLP18206 MIPEPP3-201ENST00000412105 444 ntBASIC20.18■□□□□ 0.82
VCLP18206 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.18■□□□□ 0.82
VCLP18206 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.18■□□□□ 0.82
VCLP18206 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
VCLP18206 AC133041.1-202ENST00000642053 222 ntBASIC20.18■□□□□ 0.82
VCLP18206 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.18■□□□□ 0.82
VCLP18206 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.18■□□□□ 0.82
VCLP18206 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
VCLP18206 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms