Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CTPS1P17812 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.29■□□□□ 0.84
CTPS1P17812 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTPS1P17812 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
CTPS1P17812 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTPS1P17812 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTPS1P17812 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTPS1P17812 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTPS1P17812 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CTPS1P17812 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTPS1P17812 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CTPS1P17812 AC020907.5-201ENST00000624372 1936 ntBASIC20.28■□□□□ 0.84
CTPS1P17812 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTPS1P17812 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.28■□□□□ 0.84
CTPS1P17812 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CTPS1P17812 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTPS1P17812 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTPS1P17812 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CTPS1P17812 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.28■□□□□ 0.84
CTPS1P17812 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.28■□□□□ 0.84
CTPS1P17812 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.28■□□□□ 0.84
CTPS1P17812 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTPS1P17812 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTPS1P17812 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTPS1P17812 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTPS1P17812 SMG8-203ENST00000578922 2178 ntBASIC20.27■□□□□ 0.84
CTPS1P17812 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CTPS1P17812 AP005212.1-201ENST00000581547 1997 ntBASIC20.27■□□□□ 0.84
CTPS1P17812 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTPS1P17812 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTPS1P17812 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTPS1P17812 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.27■□□□□ 0.84
CTPS1P17812 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.27■□□□□ 0.84
CTPS1P17812 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.27■□□□□ 0.84
CTPS1P17812 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTPS1P17812 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.27■□□□□ 0.84
CTPS1P17812 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTPS1P17812 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.27■□□□□ 0.84
CTPS1P17812 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTPS1P17812 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CTPS1P17812 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
CTPS1P17812 LINC01006-201ENST00000333319 2292 ntBASIC20.27■□□□□ 0.83
CTPS1P17812 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CTPS1P17812 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTPS1P17812 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CTPS1P17812 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.26■□□□□ 0.83
CTPS1P17812 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CTPS1P17812 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTPS1P17812 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTPS1P17812 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTPS1P17812 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CTPS1P17812 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.26■□□□□ 0.83
CTPS1P17812 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.26■□□□□ 0.83
CTPS1P17812 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CTPS1P17812 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTPS1P17812 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTPS1P17812 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTPS1P17812 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CTPS1P17812 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CTPS1P17812 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTPS1P17812 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.26■□□□□ 0.83
CTPS1P17812 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.26■□□□□ 0.83
CTPS1P17812 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CTPS1P17812 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.26■□□□□ 0.83
CTPS1P17812 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CTPS1P17812 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTPS1P17812 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CTPS1P17812 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTPS1P17812 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.26■□□□□ 0.83
CTPS1P17812 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.26■□□□□ 0.83
CTPS1P17812 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CTPS1P17812 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CTPS1P17812 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.25■□□□□ 0.83
CTPS1P17812 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CTPS1P17812 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CTPS1P17812 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTPS1P17812 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CTPS1P17812 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTPS1P17812 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTPS1P17812 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.25■□□□□ 0.83
CTPS1P17812 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.25■□□□□ 0.83
CTPS1P17812 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.25■□□□□ 0.83
CTPS1P17812 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.25■□□□□ 0.83
CTPS1P17812 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.25■□□□□ 0.83
CTPS1P17812 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTPS1P17812 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTPS1P17812 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTPS1P17812 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CTPS1P17812 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.25■□□□□ 0.83
CTPS1P17812 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTPS1P17812 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CTPS1P17812 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTPS1P17812 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.24■□□□□ 0.83
CTPS1P17812 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CTPS1P17812 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTPS1P17812 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.24■□□□□ 0.83
CTPS1P17812 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.24■□□□□ 0.83
CTPS1P17812 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CTPS1P17812 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.24■□□□□ 0.83
CTPS1P17812 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms