Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCL4P13236 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.14■□□□□ 0.66
CCL4P13236 AC121338.2-201ENST00000622535 1744 ntBASIC19.14■□□□□ 0.66
CCL4P13236 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
CCL4P13236 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCL4P13236 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CCL4P13236 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCL4P13236 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCL4P13236 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.14■□□□□ 0.65
CCL4P13236 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.14■□□□□ 0.65
CCL4P13236 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.14■□□□□ 0.65
CCL4P13236 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCL4P13236 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.14■□□□□ 0.65
CCL4P13236 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.14■□□□□ 0.65
CCL4P13236 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.14■□□□□ 0.65
CCL4P13236 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.14■□□□□ 0.65
CCL4P13236 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCL4P13236 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CCL4P13236 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCL4P13236 NBPF21P-201ENST00000425093 1451 ntBASIC19.14■□□□□ 0.65
CCL4P13236 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCL4P13236 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCL4P13236 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.14■□□□□ 0.65
CCL4P13236 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CCL4P13236 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCL4P13236 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCL4P13236 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCL4P13236 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCL4P13236 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCL4P13236 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.13■□□□□ 0.65
CCL4P13236 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCL4P13236 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCL4P13236 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCL4P13236 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCL4P13236 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCL4P13236 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCL4P13236 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.13■□□□□ 0.65
CCL4P13236 AL049796.1-201ENST00000565336 1766 ntBASIC19.13■□□□□ 0.65
CCL4P13236 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.13■□□□□ 0.65
CCL4P13236 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCL4P13236 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCL4P13236 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCL4P13236 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCL4P13236 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCL4P13236 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCL4P13236 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCL4P13236 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCL4P13236 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCL4P13236 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.12■□□□□ 0.65
CCL4P13236 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCL4P13236 KRT16P5-201ENST00000455284 522 ntBASIC19.12■□□□□ 0.65
CCL4P13236 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.12■□□□□ 0.65
CCL4P13236 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCL4P13236 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.12■□□□□ 0.65
CCL4P13236 AF186192.3-201ENST00000583427 947 ntBASIC19.12■□□□□ 0.65
CCL4P13236 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCL4P13236 AC026471.5-201ENST00000615068 467 ntBASIC19.12■□□□□ 0.65
CCL4P13236 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCL4P13236 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.12■□□□□ 0.65
CCL4P13236 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCL4P13236 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.11■□□□□ 0.65
CCL4P13236 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCL4P13236 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCL4P13236 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.11■□□□□ 0.65
CCL4P13236 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.11■□□□□ 0.65
CCL4P13236 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CCL4P13236 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCL4P13236 AP003071.4-201ENST00000562276 1284 ntBASIC19.11■□□□□ 0.65
CCL4P13236 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.11■□□□□ 0.65
CCL4P13236 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
CCL4P13236 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCL4P13236 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CCL4P13236 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCL4P13236 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCL4P13236 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCL4P13236 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCL4P13236 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.1■□□□□ 0.65
CCL4P13236 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCL4P13236 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCL4P13236 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CCL4P13236 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCL4P13236 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.1■□□□□ 0.65
CCL4P13236 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.1■□□□□ 0.65
CCL4P13236 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCL4P13236 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.1■□□□□ 0.65
CCL4P13236 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.1■□□□□ 0.65
CCL4P13236 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.1■□□□□ 0.65
CCL4P13236 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.1■□□□□ 0.65
CCL4P13236 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCL4P13236 CD177P1-201ENST00000606252 935 ntBASIC19.1■□□□□ 0.65
CCL4P13236 AC010331.1-201ENST00000611423 582 ntBASIC19.1■□□□□ 0.65
CCL4P13236 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCL4P13236 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.1■□□□□ 0.65
CCL4P13236 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCL4P13236 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
CCL4P13236 AC133561.1-201ENST00000568600 2415 ntBASIC19.1■□□□□ 0.65
CCL4P13236 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCL4P13236 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCL4P13236 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.09■□□□□ 0.65
CCL4P13236 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms