Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RARAP10276 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.17■□□□□ 0.98
RARAP10276 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RARAP10276 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RARAP10276 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RARAP10276 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RARAP10276 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RARAP10276 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RARAP10276 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.16■□□□□ 0.98
RARAP10276 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RARAP10276 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RARAP10276 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
RARAP10276 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.16■□□□□ 0.98
RARAP10276 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
RARAP10276 CYP21A1P-202ENST00000354927 1481 ntBASIC21.16■□□□□ 0.98
RARAP10276 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.16■□□□□ 0.98
RARAP10276 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
RARAP10276 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RARAP10276 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RARAP10276 AC092437.1-201ENST00000624794 1048 ntBASIC21.16■□□□□ 0.98
RARAP10276 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.16■□□□□ 0.98
RARAP10276 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RARAP10276 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RARAP10276 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RARAP10276 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.15■□□□□ 0.98
RARAP10276 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RARAP10276 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RARAP10276 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.15■□□□□ 0.98
RARAP10276 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.15■□□□□ 0.98
RARAP10276 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.15■□□□□ 0.98
RARAP10276 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RARAP10276 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.15■□□□□ 0.98
RARAP10276 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
RARAP10276 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RARAP10276 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RARAP10276 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
RARAP10276 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.15■□□□□ 0.98
RARAP10276 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.15■□□□□ 0.98
RARAP10276 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RARAP10276 IKBKGP1-201ENST00000612193 1073 ntBASIC21.15■□□□□ 0.98
RARAP10276 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RARAP10276 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.15■□□□□ 0.98
RARAP10276 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.15■□□□□ 0.98
RARAP10276 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.15■□□□□ 0.98
RARAP10276 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RARAP10276 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RARAP10276 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RARAP10276 AC087633.2-202ENST00000565166 1439 ntBASIC21.14■□□□□ 0.98
RARAP10276 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RARAP10276 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.14■□□□□ 0.97
RARAP10276 RARRES2P4-201ENST00000514074 484 ntBASIC21.14■□□□□ 0.97
RARAP10276 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.14■□□□□ 0.97
RARAP10276 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.14■□□□□ 0.97
RARAP10276 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RARAP10276 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RARAP10276 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.14■□□□□ 0.97
RARAP10276 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RARAP10276 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RARAP10276 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
RARAP10276 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.14■□□□□ 0.97
RARAP10276 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
RARAP10276 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RARAP10276 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RARAP10276 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RARAP10276 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RARAP10276 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
RARAP10276 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RARAP10276 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
RARAP10276 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RARAP10276 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.13■□□□□ 0.97
RARAP10276 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
RARAP10276 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.13■□□□□ 0.97
RARAP10276 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.13■□□□□ 0.97
RARAP10276 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RARAP10276 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.13■□□□□ 0.97
RARAP10276 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.13■□□□□ 0.97
RARAP10276 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
RARAP10276 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
RARAP10276 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RARAP10276 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
RARAP10276 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RARAP10276 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RARAP10276 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RARAP10276 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RARAP10276 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RARAP10276 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
RARAP10276 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RARAP10276 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RARAP10276 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RARAP10276 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RARAP10276 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.12■□□□□ 0.97
RARAP10276 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
RARAP10276 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
RARAP10276 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.12■□□□□ 0.97
RARAP10276 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RARAP10276 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.12■□□□□ 0.97
RARAP10276 AL356652.1-201ENST00000615962 565 ntBASIC21.12■□□□□ 0.97
RARAP10276 AC231657.2-201ENST00000624556 255 ntBASIC21.12■□□□□ 0.97
RARAP10276 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RARAP10276 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms