Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.34■□□□□ 0.53
FREM3P0C091 LINC01521-201ENST00000504184 1943 ntBASIC18.34■□□□□ 0.53
FREM3P0C091 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
FREM3P0C091 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.34■□□□□ 0.53
FREM3P0C091 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
FREM3P0C091 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FREM3P0C091 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
FREM3P0C091 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FREM3P0C091 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FREM3P0C091 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.34■□□□□ 0.53
FREM3P0C091 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
FREM3P0C091 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.34■□□□□ 0.53
FREM3P0C091 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
FREM3P0C091 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.34■□□□□ 0.53
FREM3P0C091 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FREM3P0C091 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
FREM3P0C091 AC073130.3-201ENST00000624389 2278 ntBASIC18.34■□□□□ 0.53
FREM3P0C091 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FREM3P0C091 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FREM3P0C091 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FREM3P0C091 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
FREM3P0C091 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
FREM3P0C091 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
FREM3P0C091 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FREM3P0C091 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FREM3P0C091 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.34■□□□□ 0.53
FREM3P0C091 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FREM3P0C091 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.34■□□□□ 0.53
FREM3P0C091 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FREM3P0C091 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.34■□□□□ 0.53
FREM3P0C091 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
FREM3P0C091 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
FREM3P0C091 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
FREM3P0C091 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FREM3P0C091 KRT17P3-201ENST00000420566 1262 ntBASIC18.33■□□□□ 0.52
FREM3P0C091 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
FREM3P0C091 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
FREM3P0C091 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
FREM3P0C091 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
FREM3P0C091 AC027702.1-201ENST00000563810 1770 ntBASIC18.33■□□□□ 0.52
FREM3P0C091 FEM1AP1-201ENST00000431297 1995 ntBASIC18.33■□□□□ 0.52
FREM3P0C091 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
FREM3P0C091 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
FREM3P0C091 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FREM3P0C091 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.33■□□□□ 0.52
FREM3P0C091 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FREM3P0C091 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.33■□□□□ 0.52
FREM3P0C091 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FREM3P0C091 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.33■□□□□ 0.52
FREM3P0C091 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
FREM3P0C091 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FREM3P0C091 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.32■□□□□ 0.52
FREM3P0C091 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FREM3P0C091 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FREM3P0C091 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.32■□□□□ 0.52
FREM3P0C091 ESRRAP1-201ENST00000400596 1257 ntBASIC18.32■□□□□ 0.52
FREM3P0C091 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
FREM3P0C091 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.32■□□□□ 0.52
FREM3P0C091 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.32■□□□□ 0.52
FREM3P0C091 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FREM3P0C091 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FREM3P0C091 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FREM3P0C091 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FREM3P0C091 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
FREM3P0C091 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
FREM3P0C091 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FREM3P0C091 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.32■□□□□ 0.52
FREM3P0C091 AL391422.3-201ENST00000603791 2761 ntBASIC18.32■□□□□ 0.52
FREM3P0C091 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FREM3P0C091 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FREM3P0C091 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FREM3P0C091 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.32■□□□□ 0.52
FREM3P0C091 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FREM3P0C091 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FREM3P0C091 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.32■□□□□ 0.52
FREM3P0C091 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.32■□□□□ 0.52
FREM3P0C091 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.32■□□□□ 0.52
FREM3P0C091 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.32■□□□□ 0.52
FREM3P0C091 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
FREM3P0C091 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
FREM3P0C091 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FREM3P0C091 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FREM3P0C091 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
FREM3P0C091 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
FREM3P0C091 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
FREM3P0C091 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
FREM3P0C091 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.31■□□□□ 0.52
FREM3P0C091 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.31■□□□□ 0.52
FREM3P0C091 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.31■□□□□ 0.52
FREM3P0C091 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FREM3P0C091 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.31■□□□□ 0.52
FREM3P0C091 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
FREM3P0C091 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.31■□□□□ 0.52
FREM3P0C091 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
FREM3P0C091 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
FREM3P0C091 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FREM3P0C091 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.31■□□□□ 0.52
FREM3P0C091 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
FREM3P0C091 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.31■□□□□ 0.52
FREM3P0C091 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms