Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
HOXC4P09017 AC124016.1-201ENST00000609552 612 ntBASIC19.78■□□□□ 0.76
HOXC4P09017 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXC4P09017 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXC4P09017 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXC4P09017 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXC4P09017 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
HOXC4P09017 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.78■□□□□ 0.76
HOXC4P09017 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXC4P09017 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXC4P09017 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXC4P09017 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
HOXC4P09017 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.78■□□□□ 0.76
HOXC4P09017 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HOXC4P09017 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.77■□□□□ 0.76
HOXC4P09017 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
HOXC4P09017 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.77■□□□□ 0.76
HOXC4P09017 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HOXC4P09017 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.77■□□□□ 0.76
HOXC4P09017 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HOXC4P09017 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
HOXC4P09017 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HOXC4P09017 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.77■□□□□ 0.76
HOXC4P09017 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.77■□□□□ 0.76
HOXC4P09017 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.77■□□□□ 0.76
HOXC4P09017 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.77■□□□□ 0.76
HOXC4P09017 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.77■□□□□ 0.76
HOXC4P09017 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HOXC4P09017 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HOXC4P09017 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HOXC4P09017 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
HOXC4P09017 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
HOXC4P09017 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.76■□□□□ 0.75
HOXC4P09017 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HOXC4P09017 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
HOXC4P09017 AC005229.4-201ENST00000610085 2198 ntBASIC19.76■□□□□ 0.75
HOXC4P09017 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.76■□□□□ 0.75
HOXC4P09017 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HOXC4P09017 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HOXC4P09017 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
HOXC4P09017 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
HOXC4P09017 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.76■□□□□ 0.75
HOXC4P09017 AC008550.1-201ENST00000511500 884 ntBASIC19.76■□□□□ 0.75
HOXC4P09017 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.76■□□□□ 0.75
HOXC4P09017 PRKY-204ENST00000533551 1019 ntBASIC19.76■□□□□ 0.75
HOXC4P09017 AC110285.5-201ENST00000611501 352 ntBASIC19.76■□□□□ 0.75
HOXC4P09017 AL023875.1-201ENST00000640777 796 ntBASIC19.76■□□□□ 0.75
HOXC4P09017 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HOXC4P09017 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HOXC4P09017 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HOXC4P09017 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HOXC4P09017 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.76■□□□□ 0.75
HOXC4P09017 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.75■□□□□ 0.75
HOXC4P09017 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
HOXC4P09017 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXC4P09017 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXC4P09017 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
HOXC4P09017 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HOXC4P09017 AC239809.2-201ENST00000415381 517 ntBASIC19.75■□□□□ 0.75
HOXC4P09017 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.75■□□□□ 0.75
HOXC4P09017 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.75■□□□□ 0.75
HOXC4P09017 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HOXC4P09017 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
HOXC4P09017 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXC4P09017 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
HOXC4P09017 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
HOXC4P09017 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.74■□□□□ 0.75
HOXC4P09017 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
HOXC4P09017 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.74■□□□□ 0.75
HOXC4P09017 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC4P09017 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC4P09017 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.74■□□□□ 0.75
HOXC4P09017 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC4P09017 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC4P09017 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC4P09017 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.74■□□□□ 0.75
HOXC4P09017 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
HOXC4P09017 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
HOXC4P09017 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC4P09017 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC4P09017 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC4P09017 RPS2P4-201ENST00000476944 856 ntBASIC19.74■□□□□ 0.75
HOXC4P09017 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.74■□□□□ 0.75
HOXC4P09017 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.74■□□□□ 0.75
HOXC4P09017 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.74■□□□□ 0.75
HOXC4P09017 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.74■□□□□ 0.75
HOXC4P09017 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.74■□□□□ 0.75
HOXC4P09017 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
HOXC4P09017 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.73■□□□□ 0.75
HOXC4P09017 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HOXC4P09017 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
HOXC4P09017 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXC4P09017 AC092720.2-201ENST00000602388 1665 ntBASIC19.73■□□□□ 0.75
HOXC4P09017 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.73■□□□□ 0.75
HOXC4P09017 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
HOXC4P09017 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
HOXC4P09017 MIR718-201ENST00000390190 70 ntBASIC19.73■□□□□ 0.75
HOXC4P09017 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.73■□□□□ 0.75
HOXC4P09017 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXC4P09017 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms