Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RETP07949 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.38■□□□□ 0.85
RETP07949 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RETP07949 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
RETP07949 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.37■□□□□ 0.85
RETP07949 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.37■□□□□ 0.85
RETP07949 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RETP07949 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RETP07949 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RETP07949 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
RETP07949 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.37■□□□□ 0.85
RETP07949 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.37■□□□□ 0.85
RETP07949 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.37■□□□□ 0.85
RETP07949 AC005363.2-201ENST00000618631 242 ntBASIC20.37■□□□□ 0.85
RETP07949 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RETP07949 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
RETP07949 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.37■□□□□ 0.85
RETP07949 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.37■□□□□ 0.85
RETP07949 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
RETP07949 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RETP07949 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RETP07949 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.37■□□□□ 0.85
RETP07949 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RETP07949 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RETP07949 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RETP07949 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
RETP07949 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RETP07949 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RETP07949 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RETP07949 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RETP07949 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
RETP07949 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RETP07949 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
RETP07949 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RETP07949 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
RETP07949 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.36■□□□□ 0.85
RETP07949 AL355355.2-201ENST00000442321 338 ntBASIC20.36■□□□□ 0.85
RETP07949 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.36■□□□□ 0.85
RETP07949 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.36■□□□□ 0.85
RETP07949 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.36■□□□□ 0.85
RETP07949 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.36■□□□□ 0.85
RETP07949 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.36■□□□□ 0.85
RETP07949 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RETP07949 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RETP07949 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.36■□□□□ 0.85
RETP07949 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RETP07949 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RETP07949 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.36■□□□□ 0.85
RETP07949 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RETP07949 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RETP07949 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RETP07949 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RETP07949 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RETP07949 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.35■□□□□ 0.85
RETP07949 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.35■□□□□ 0.85
RETP07949 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.35■□□□□ 0.85
RETP07949 AC005829.2-201ENST00000571422 1056 ntBASIC20.35■□□□□ 0.85
RETP07949 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
RETP07949 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.35■□□□□ 0.85
RETP07949 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
RETP07949 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RETP07949 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.35■□□□□ 0.85
RETP07949 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.35■□□□□ 0.85
RETP07949 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
RETP07949 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.35■□□□□ 0.85
RETP07949 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
RETP07949 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RETP07949 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
RETP07949 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RETP07949 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RETP07949 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RETP07949 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RETP07949 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RETP07949 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RETP07949 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RETP07949 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
RETP07949 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RETP07949 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.34■□□□□ 0.85
RETP07949 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.34■□□□□ 0.85
RETP07949 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.34■□□□□ 0.85
RETP07949 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RETP07949 AC145285.6-201ENST00000604632 637 ntBASIC20.34■□□□□ 0.85
RETP07949 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RETP07949 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
RETP07949 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RETP07949 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RETP07949 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RETP07949 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RETP07949 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RETP07949 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
RETP07949 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.33■□□□□ 0.85
RETP07949 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.33■□□□□ 0.85
RETP07949 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.33■□□□□ 0.85
RETP07949 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RETP07949 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.33■□□□□ 0.85
RETP07949 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.33■□□□□ 0.85
RETP07949 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.33■□□□□ 0.85
RETP07949 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.33■□□□□ 0.85
RETP07949 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
RETP07949 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms