Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TCRAP04437 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TCRAP04437 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TCRAP04437 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
TCRAP04437 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC15.32■□□□□ 0.04
TCRAP04437 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TCRAP04437 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TCRAP04437 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TCRAP04437 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC15.32■□□□□ 0.04
TCRAP04437 DPP3P2-201ENST00000416030 1696 ntBASIC15.32■□□□□ 0.04
TCRAP04437 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TCRAP04437 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TCRAP04437 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TCRAP04437 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TCRAP04437 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TCRAP04437 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TCRAP04437 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TCRAP04437 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC15.32■□□□□ 0.04
TCRAP04437 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC15.32■□□□□ 0.04
TCRAP04437 CPT2-209ENST00000636935 803 ntTSL 5 BASIC15.32■□□□□ 0.04
TCRAP04437 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC15.32■□□□□ 0.04
TCRAP04437 MPST-204ENST00000404393 1329 ntTSL 5 BASIC15.32■□□□□ 0.04
TCRAP04437 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TCRAP04437 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC15.32■□□□□ 0.04
TCRAP04437 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
TCRAP04437 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TCRAP04437 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TCRAP04437 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TCRAP04437 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TCRAP04437 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC15.32■□□□□ 0.04
TCRAP04437 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
TCRAP04437 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TCRAP04437 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
TCRAP04437 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TCRAP04437 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC15.31■□□□□ 0.04
TCRAP04437 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TCRAP04437 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TCRAP04437 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TCRAP04437 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC15.31■□□□□ 0.04
TCRAP04437 PTPA-214ENST00000423100 988 ntTSL 2 BASIC15.31■□□□□ 0.04
TCRAP04437 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TCRAP04437 AC027682.1-201ENST00000562846 899 ntBASIC15.31■□□□□ 0.04
TCRAP04437 AC120498.10-201ENST00000621827 505 ntBASIC15.31■□□□□ 0.04
TCRAP04437 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TCRAP04437 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC15.31■□□□□ 0.04
TCRAP04437 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TCRAP04437 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TCRAP04437 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC15.31■□□□□ 0.04
TCRAP04437 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TCRAP04437 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TCRAP04437 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC15.31■□□□□ 0.04
TCRAP04437 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TCRAP04437 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TCRAP04437 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TCRAP04437 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TCRAP04437 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TCRAP04437 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TCRAP04437 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TCRAP04437 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TCRAP04437 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TCRAP04437 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TCRAP04437 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC15.3■□□□□ 0.04
TCRAP04437 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TCRAP04437 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TCRAP04437 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TCRAP04437 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TCRAP04437 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC15.3■□□□□ 0.04
TCRAP04437 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TCRAP04437 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC15.3■□□□□ 0.04
TCRAP04437 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC15.3■□□□□ 0.04
TCRAP04437 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC15.3■□□□□ 0.04
TCRAP04437 AC093484.2-201ENST00000580996 2166 ntBASIC15.3■□□□□ 0.04
TCRAP04437 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TCRAP04437 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC15.3■□□□□ 0.04
TCRAP04437 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TCRAP04437 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TCRAP04437 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TCRAP04437 AC004408.2-201ENST00000623613 2777 ntBASIC15.3■□□□□ 0.04
TCRAP04437 BX119927.1-201ENST00000636596 1552 ntBASIC15.3■□□□□ 0.04
TCRAP04437 MCC-208ENST00000514701 2855 ntTSL 2 BASIC15.3■□□□□ 0.04
TCRAP04437 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TCRAP04437 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TCRAP04437 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCRAP04437 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TCRAP04437 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCRAP04437 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TCRAP04437 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC15.29■□□□□ 0.04
TCRAP04437 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TCRAP04437 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCRAP04437 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC15.29■□□□□ 0.04
TCRAP04437 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCRAP04437 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCRAP04437 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TCRAP04437 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TCRAP04437 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
TCRAP04437 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TCRAP04437 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TCRAP04437 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCRAP04437 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC15.29■□□□□ 0.04
TCRAP04437 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms