Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC16.94■□□□□ 0.3
CD74P04233 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.94■□□□□ 0.3
CD74P04233 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC16.94■□□□□ 0.3
CD74P04233 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC16.94■□□□□ 0.3
CD74P04233 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC16.94■□□□□ 0.3
CD74P04233 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CD74P04233 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC16.94■□□□□ 0.3
CD74P04233 AICDA-202ENST00000537228 667 ntTSL 5 BASIC16.94■□□□□ 0.3
CD74P04233 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CD74P04233 SRR-208ENST00000576848 588 ntTSL 4 BASIC16.94■□□□□ 0.3
CD74P04233 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC16.94■□□□□ 0.3
CD74P04233 AC126544.1-201ENST00000580842 1059 ntBASIC16.94■□□□□ 0.3
CD74P04233 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.94■□□□□ 0.3
CD74P04233 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD74P04233 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD74P04233 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD74P04233 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.94■□□□□ 0.3
CD74P04233 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD74P04233 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CD74P04233 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CD74P04233 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC16.93■□□□□ 0.3
CD74P04233 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CD74P04233 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CD74P04233 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CD74P04233 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.93■□□□□ 0.3
CD74P04233 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.93■□□□□ 0.3
CD74P04233 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.93■□□□□ 0.3
CD74P04233 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CD74P04233 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CD74P04233 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.93■□□□□ 0.3
CD74P04233 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CD74P04233 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC16.93■□□□□ 0.3
CD74P04233 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CD74P04233 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CD74P04233 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CD74P04233 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.93■□□□□ 0.3
CD74P04233 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CD74P04233 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
CD74P04233 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CD74P04233 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD74P04233 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.92■□□□□ 0.3
CD74P04233 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.92■□□□□ 0.3
CD74P04233 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CD74P04233 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD74P04233 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CD74P04233 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CD74P04233 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.92■□□□□ 0.3
CD74P04233 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD74P04233 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CD74P04233 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD74P04233 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD74P04233 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD74P04233 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD74P04233 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CD74P04233 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD74P04233 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CD74P04233 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.92■□□□□ 0.3
CD74P04233 RPP21-222ENST00000433076 577 ntTSL 2 BASIC16.92■□□□□ 0.3
CD74P04233 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CD74P04233 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC16.92■□□□□ 0.3
CD74P04233 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC16.92■□□□□ 0.3
CD74P04233 TRIR-202ENST00000588213 841 ntTSL 3 BASIC16.92■□□□□ 0.3
CD74P04233 KRT16P2-201ENST00000414673 1423 ntBASIC16.92■□□□□ 0.3
CD74P04233 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CD74P04233 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
CD74P04233 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD74P04233 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD74P04233 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC16.92■□□□□ 0.3
CD74P04233 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.92■□□□□ 0.3
CD74P04233 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD74P04233 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD74P04233 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD74P04233 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD74P04233 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.91■□□□□ 0.3
CD74P04233 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.91■□□□□ 0.3
CD74P04233 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CD74P04233 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD74P04233 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.91■□□□□ 0.3
CD74P04233 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.91■□□□□ 0.3
CD74P04233 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD74P04233 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD74P04233 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD74P04233 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD74P04233 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD74P04233 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD74P04233 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC16.91■□□□□ 0.3
CD74P04233 PTPA-214ENST00000423100 988 ntTSL 2 BASIC16.91■□□□□ 0.3
CD74P04233 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CD74P04233 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD74P04233 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD74P04233 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD74P04233 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.91■□□□□ 0.3
CD74P04233 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CD74P04233 NEFHP1-201ENST00000412845 2629 ntBASIC16.91■□□□□ 0.3
CD74P04233 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.91■□□□□ 0.3
CD74P04233 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.91■□□□□ 0.3
CD74P04233 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CD74P04233 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD74P04233 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD74P04233 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms