Protein–RNA interactions for Protein: P04003

C4BPA, C4b-binding protein alpha chain, humanhuman

Known RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4BPAP04003 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.7■■□□□ 1.06
C4BPAP04003 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
C4BPAP04003 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
C4BPAP04003 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
C4BPAP04003 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
C4BPAP04003 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.7■■□□□ 1.06
C4BPAP04003 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
C4BPAP04003 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
C4BPAP04003 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
C4BPAP04003 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.7■■□□□ 1.06
C4BPAP04003 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.7■■□□□ 1.06
C4BPAP04003 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
C4BPAP04003 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.7■■□□□ 1.06
C4BPAP04003 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
C4BPAP04003 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
C4BPAP04003 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.7■■□□□ 1.06
C4BPAP04003 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.7■■□□□ 1.06
C4BPAP04003 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
C4BPAP04003 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
C4BPAP04003 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
C4BPAP04003 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.69■■□□□ 1.06
C4BPAP04003 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
C4BPAP04003 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
C4BPAP04003 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
C4BPAP04003 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.69■■□□□ 1.06
C4BPAP04003 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
C4BPAP04003 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
C4BPAP04003 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
C4BPAP04003 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.69■■□□□ 1.06
C4BPAP04003 AC023632.3-201ENST00000521633 145 ntBASIC21.69■■□□□ 1.06
C4BPAP04003 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.69■■□□□ 1.06
C4BPAP04003 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.69■■□□□ 1.06
C4BPAP04003 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
C4BPAP04003 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
C4BPAP04003 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
C4BPAP04003 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
C4BPAP04003 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
C4BPAP04003 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
C4BPAP04003 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
C4BPAP04003 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
C4BPAP04003 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
C4BPAP04003 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
C4BPAP04003 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
C4BPAP04003 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
C4BPAP04003 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.69■■□□□ 1.06
C4BPAP04003 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.69■■□□□ 1.06
C4BPAP04003 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
C4BPAP04003 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
C4BPAP04003 AC099778.1-201ENST00000568593 1911 ntBASIC21.68■■□□□ 1.06
C4BPAP04003 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.68■■□□□ 1.06
C4BPAP04003 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
C4BPAP04003 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
C4BPAP04003 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
C4BPAP04003 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
C4BPAP04003 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
C4BPAP04003 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
C4BPAP04003 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.68■■□□□ 1.06
C4BPAP04003 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.68■■□□□ 1.06
C4BPAP04003 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
C4BPAP04003 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
C4BPAP04003 KRT8P17-201ENST00000453110 1448 ntBASIC21.68■■□□□ 1.06
C4BPAP04003 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.68■■□□□ 1.06
C4BPAP04003 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
C4BPAP04003 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.68■■□□□ 1.06
C4BPAP04003 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
C4BPAP04003 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
C4BPAP04003 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.68■■□□□ 1.06
C4BPAP04003 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
C4BPAP04003 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
C4BPAP04003 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
C4BPAP04003 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
C4BPAP04003 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
C4BPAP04003 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
C4BPAP04003 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
C4BPAP04003 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
C4BPAP04003 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
C4BPAP04003 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
C4BPAP04003 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
C4BPAP04003 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
C4BPAP04003 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.67■■□□□ 1.06
C4BPAP04003 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
C4BPAP04003 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.67■■□□□ 1.06
C4BPAP04003 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
C4BPAP04003 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.67■■□□□ 1.06
C4BPAP04003 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
C4BPAP04003 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.67■■□□□ 1.06
C4BPAP04003 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.67■■□□□ 1.06
C4BPAP04003 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
C4BPAP04003 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
C4BPAP04003 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
C4BPAP04003 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.66■■□□□ 1.06
C4BPAP04003 AL391422.3-201ENST00000603791 2761 ntBASIC21.66■■□□□ 1.06
C4BPAP04003 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
C4BPAP04003 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
C4BPAP04003 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
C4BPAP04003 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
C4BPAP04003 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.66■■□□□ 1.06
C4BPAP04003 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
C4BPAP04003 AL031963.3-201ENST00000606441 850 ntBASIC21.66■■□□□ 1.06
C4BPAP04003 HLA-B-256ENST00000639848 1089 ntBASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms