Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.99■□□□□ 0.63
MT-ND1P03886 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
MT-ND1P03886 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
MT-ND1P03886 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.99■□□□□ 0.63
MT-ND1P03886 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
MT-ND1P03886 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MT-ND1P03886 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
MT-ND1P03886 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
MT-ND1P03886 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MT-ND1P03886 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
MT-ND1P03886 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MT-ND1P03886 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MT-ND1P03886 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.98■□□□□ 0.63
MT-ND1P03886 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.98■□□□□ 0.63
MT-ND1P03886 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MT-ND1P03886 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.98■□□□□ 0.63
MT-ND1P03886 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.98■□□□□ 0.63
MT-ND1P03886 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MT-ND1P03886 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.98■□□□□ 0.63
MT-ND1P03886 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.98■□□□□ 0.63
MT-ND1P03886 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.98■□□□□ 0.63
MT-ND1P03886 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.98■□□□□ 0.63
MT-ND1P03886 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.98■□□□□ 0.63
MT-ND1P03886 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.98■□□□□ 0.63
MT-ND1P03886 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MT-ND1P03886 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MT-ND1P03886 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MT-ND1P03886 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MT-ND1P03886 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
MT-ND1P03886 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.97■□□□□ 0.63
MT-ND1P03886 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
MT-ND1P03886 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
MT-ND1P03886 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
MT-ND1P03886 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.97■□□□□ 0.63
MT-ND1P03886 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.97■□□□□ 0.63
MT-ND1P03886 TNXA-203ENST00000507684 2038 ntBASIC18.97■□□□□ 0.63
MT-ND1P03886 AC142381.2-201ENST00000566120 298 ntBASIC18.97■□□□□ 0.63
MT-ND1P03886 AC053503.5-201ENST00000601508 636 ntBASIC18.97■□□□□ 0.63
MT-ND1P03886 AL358852.1-201ENST00000623174 1268 ntBASIC18.97■□□□□ 0.63
MT-ND1P03886 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.97■□□□□ 0.63
MT-ND1P03886 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MT-ND1P03886 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MT-ND1P03886 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MT-ND1P03886 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.97■□□□□ 0.63
MT-ND1P03886 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MT-ND1P03886 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MT-ND1P03886 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MT-ND1P03886 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MT-ND1P03886 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MT-ND1P03886 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.96■□□□□ 0.63
MT-ND1P03886 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MT-ND1P03886 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
MT-ND1P03886 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MT-ND1P03886 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MT-ND1P03886 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MT-ND1P03886 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.96■□□□□ 0.63
MT-ND1P03886 TPRG1LP1-201ENST00000598702 760 ntBASIC18.96■□□□□ 0.63
MT-ND1P03886 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MT-ND1P03886 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.96■□□□□ 0.63
MT-ND1P03886 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
MT-ND1P03886 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.96■□□□□ 0.63
MT-ND1P03886 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
MT-ND1P03886 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.96■□□□□ 0.63
MT-ND1P03886 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MT-ND1P03886 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MT-ND1P03886 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
MT-ND1P03886 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MT-ND1P03886 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
MT-ND1P03886 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MT-ND1P03886 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.95■□□□□ 0.62
MT-ND1P03886 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.95■□□□□ 0.62
MT-ND1P03886 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MT-ND1P03886 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MT-ND1P03886 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.95■□□□□ 0.62
MT-ND1P03886 AL691432.2-201ENST00000607222 2038 ntBASIC18.95■□□□□ 0.62
MT-ND1P03886 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
MT-ND1P03886 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.95■□□□□ 0.62
MT-ND1P03886 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MT-ND1P03886 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MT-ND1P03886 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.95■□□□□ 0.62
MT-ND1P03886 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.95■□□□□ 0.62
MT-ND1P03886 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MT-ND1P03886 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.95■□□□□ 0.62
MT-ND1P03886 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MT-ND1P03886 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
MT-ND1P03886 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
MT-ND1P03886 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.95■□□□□ 0.62
MT-ND1P03886 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MT-ND1P03886 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MT-ND1P03886 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MT-ND1P03886 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MT-ND1P03886 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.95■□□□□ 0.62
MT-ND1P03886 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.95■□□□□ 0.62
MT-ND1P03886 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
MT-ND1P03886 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MT-ND1P03886 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
MT-ND1P03886 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MT-ND1P03886 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MT-ND1P03886 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.94■□□□□ 0.62
MT-ND1P03886 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms