Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 AC243732.1-201ENST00000612648 864 ntBASIC18.08■□□□□ 0.48
HLA-DQA2P01906 AL162377.1-201ENST00000618844 1793 ntBASIC18.08■□□□□ 0.48
HLA-DQA2P01906 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.08■□□□□ 0.48
HLA-DQA2P01906 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
HLA-DQA2P01906 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DQA2P01906 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.08■□□□□ 0.48
HLA-DQA2P01906 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.08■□□□□ 0.48
HLA-DQA2P01906 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DQA2P01906 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DQA2P01906 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DQA2P01906 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DQA2P01906 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DQA2P01906 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DQA2P01906 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.08■□□□□ 0.48
HLA-DQA2P01906 AFG3L1P-217ENST00000557444 2447 ntBASIC18.08■□□□□ 0.48
HLA-DQA2P01906 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.08■□□□□ 0.48
HLA-DQA2P01906 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DQA2P01906 AC099778.1-201ENST00000568593 1911 ntBASIC18.08■□□□□ 0.48
HLA-DQA2P01906 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DQA2P01906 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
HLA-DQA2P01906 AC019069.1-201ENST00000610008 1333 ntBASIC18.07■□□□□ 0.48
HLA-DQA2P01906 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.07■□□□□ 0.48
HLA-DQA2P01906 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DQA2P01906 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.07■□□□□ 0.48
HLA-DQA2P01906 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DQA2P01906 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DQA2P01906 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DQA2P01906 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DQA2P01906 CDV3P1-201ENST00000471403 739 ntBASIC18.07■□□□□ 0.48
HLA-DQA2P01906 SLC7A5P1-201ENST00000568957 537 ntBASIC18.07■□□□□ 0.48
HLA-DQA2P01906 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.07■□□□□ 0.48
HLA-DQA2P01906 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DQA2P01906 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.07■□□□□ 0.48
HLA-DQA2P01906 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DQA2P01906 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
HLA-DQA2P01906 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DQA2P01906 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.07■□□□□ 0.48
HLA-DQA2P01906 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DQA2P01906 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DQA2P01906 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.07■□□□□ 0.48
HLA-DQA2P01906 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.07■□□□□ 0.48
HLA-DQA2P01906 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQA2P01906 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQA2P01906 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQA2P01906 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
HLA-DQA2P01906 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQA2P01906 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQA2P01906 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQA2P01906 SMG8-203ENST00000578922 2178 ntBASIC18.06■□□□□ 0.48
HLA-DQA2P01906 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQA2P01906 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQA2P01906 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
HLA-DQA2P01906 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.06■□□□□ 0.48
HLA-DQA2P01906 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.06■□□□□ 0.48
HLA-DQA2P01906 UBE2DNL-204ENST00000602536 740 ntBASIC18.06■□□□□ 0.48
HLA-DQA2P01906 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
HLA-DQA2P01906 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.06■□□□□ 0.48
HLA-DQA2P01906 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.06■□□□□ 0.48
HLA-DQA2P01906 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
HLA-DQA2P01906 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQA2P01906 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQA2P01906 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQA2P01906 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.06■□□□□ 0.48
HLA-DQA2P01906 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQA2P01906 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.05■□□□□ 0.48
HLA-DQA2P01906 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQA2P01906 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
HLA-DQA2P01906 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
HLA-DQA2P01906 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQA2P01906 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQA2P01906 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
HLA-DQA2P01906 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQA2P01906 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQA2P01906 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQA2P01906 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.05■□□□□ 0.48
HLA-DQA2P01906 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQA2P01906 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQA2P01906 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.05■□□□□ 0.48
HLA-DQA2P01906 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQA2P01906 FAM21FP-204ENST00000608637 956 ntBASIC18.05■□□□□ 0.48
HLA-DQA2P01906 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.05■□□□□ 0.48
HLA-DQA2P01906 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQA2P01906 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.05■□□□□ 0.48
HLA-DQA2P01906 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQA2P01906 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQA2P01906 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQA2P01906 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.05■□□□□ 0.48
HLA-DQA2P01906 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQA2P01906 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQA2P01906 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQA2P01906 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQA2P01906 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQA2P01906 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DQA2P01906 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DQA2P01906 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DQA2P01906 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.04■□□□□ 0.48
HLA-DQA2P01906 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
HLA-DQA2P01906 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.04■□□□□ 0.48
HLA-DQA2P01906 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DQA2P01906 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms