Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MT-CO1P00395 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
MT-CO1P00395 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MT-CO1P00395 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MT-CO1P00395 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.66■□□□□ 0.9
MT-CO1P00395 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
MT-CO1P00395 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.66■□□□□ 0.9
MT-CO1P00395 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.66■□□□□ 0.9
MT-CO1P00395 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MT-CO1P00395 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
MT-CO1P00395 HLA-B-256ENST00000639848 1089 ntBASIC20.66■□□□□ 0.9
MT-CO1P00395 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.66■□□□□ 0.9
MT-CO1P00395 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
MT-CO1P00395 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
MT-CO1P00395 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MT-CO1P00395 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MT-CO1P00395 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MT-CO1P00395 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.65■□□□□ 0.9
MT-CO1P00395 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MT-CO1P00395 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MT-CO1P00395 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
MT-CO1P00395 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MT-CO1P00395 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.65■□□□□ 0.9
MT-CO1P00395 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
MT-CO1P00395 POU5F1P3-201ENST00000428824 1078 ntBASIC20.65■□□□□ 0.9
MT-CO1P00395 UNC93B5-201ENST00000530315 699 ntBASIC20.65■□□□□ 0.9
MT-CO1P00395 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MT-CO1P00395 AC060766.5-201ENST00000590539 871 ntBASIC20.65■□□□□ 0.9
MT-CO1P00395 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MT-CO1P00395 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
MT-CO1P00395 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
MT-CO1P00395 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MT-CO1P00395 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MT-CO1P00395 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MT-CO1P00395 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.64■□□□□ 0.89
MT-CO1P00395 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MT-CO1P00395 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MT-CO1P00395 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
MT-CO1P00395 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.64■□□□□ 0.89
MT-CO1P00395 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.64■□□□□ 0.89
MT-CO1P00395 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.64■□□□□ 0.89
MT-CO1P00395 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MT-CO1P00395 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
MT-CO1P00395 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
MT-CO1P00395 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MT-CO1P00395 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
MT-CO1P00395 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
MT-CO1P00395 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.64■□□□□ 0.89
MT-CO1P00395 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
MT-CO1P00395 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MT-CO1P00395 AC092368.3-202ENST00000574180 1591 ntBASIC20.63■□□□□ 0.89
MT-CO1P00395 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MT-CO1P00395 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MT-CO1P00395 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
MT-CO1P00395 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MT-CO1P00395 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MT-CO1P00395 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MT-CO1P00395 ESRRAP1-201ENST00000400596 1257 ntBASIC20.63■□□□□ 0.89
MT-CO1P00395 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
MT-CO1P00395 FAM201B-201ENST00000458407 597 ntBASIC20.63■□□□□ 0.89
MT-CO1P00395 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.63■□□□□ 0.89
MT-CO1P00395 PNMA6B-201ENST00000538162 1200 ntBASIC20.63■□□□□ 0.89
MT-CO1P00395 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.63■□□□□ 0.89
MT-CO1P00395 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.63■□□□□ 0.89
MT-CO1P00395 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MT-CO1P00395 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
MT-CO1P00395 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MT-CO1P00395 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MT-CO1P00395 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MT-CO1P00395 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MT-CO1P00395 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MT-CO1P00395 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MT-CO1P00395 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
MT-CO1P00395 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MT-CO1P00395 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MT-CO1P00395 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
MT-CO1P00395 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MT-CO1P00395 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MT-CO1P00395 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.62■□□□□ 0.89
MT-CO1P00395 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.62■□□□□ 0.89
MT-CO1P00395 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.62■□□□□ 0.89
MT-CO1P00395 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
MT-CO1P00395 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MT-CO1P00395 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.62■□□□□ 0.89
MT-CO1P00395 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.62■□□□□ 0.89
MT-CO1P00395 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MT-CO1P00395 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
MT-CO1P00395 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.62■□□□□ 0.89
MT-CO1P00395 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
MT-CO1P00395 AC007225.1-201ENST00000566331 1836 ntBASIC20.62■□□□□ 0.89
MT-CO1P00395 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MT-CO1P00395 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MT-CO1P00395 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.61■□□□□ 0.89
MT-CO1P00395 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
MT-CO1P00395 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MT-CO1P00395 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MT-CO1P00395 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MT-CO1P00395 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MT-CO1P00395 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
MT-CO1P00395 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms