Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLPTM1O96005 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLPTM1O96005 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLPTM1O96005 AC019069.1-201ENST00000610008 1333 ntBASIC18.97■□□□□ 0.63
CLPTM1O96005 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLPTM1O96005 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.97■□□□□ 0.63
CLPTM1O96005 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
CLPTM1O96005 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CLPTM1O96005 AC003102.1-202ENST00000563394 1796 ntBASIC18.96■□□□□ 0.63
CLPTM1O96005 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLPTM1O96005 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLPTM1O96005 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLPTM1O96005 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLPTM1O96005 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLPTM1O96005 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CLPTM1O96005 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLPTM1O96005 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CLPTM1O96005 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.96■□□□□ 0.63
CLPTM1O96005 AL136967.2-201ENST00000623968 743 ntBASIC18.96■□□□□ 0.63
CLPTM1O96005 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLPTM1O96005 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLPTM1O96005 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLPTM1O96005 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLPTM1O96005 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLPTM1O96005 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CLPTM1O96005 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLPTM1O96005 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLPTM1O96005 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLPTM1O96005 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLPTM1O96005 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLPTM1O96005 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.95■□□□□ 0.62
CLPTM1O96005 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLPTM1O96005 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLPTM1O96005 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
CLPTM1O96005 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLPTM1O96005 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLPTM1O96005 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.95■□□□□ 0.62
CLPTM1O96005 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLPTM1O96005 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLPTM1O96005 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLPTM1O96005 SLC47A1P1-202ENST00000449666 945 ntBASIC18.95■□□□□ 0.62
CLPTM1O96005 AC010525.1-201ENST00000585559 441 ntBASIC18.95■□□□□ 0.62
CLPTM1O96005 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLPTM1O96005 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLPTM1O96005 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLPTM1O96005 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLPTM1O96005 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.95■□□□□ 0.62
CLPTM1O96005 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CLPTM1O96005 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLPTM1O96005 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CLPTM1O96005 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.94■□□□□ 0.62
CLPTM1O96005 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLPTM1O96005 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLPTM1O96005 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLPTM1O96005 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLPTM1O96005 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLPTM1O96005 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.94■□□□□ 0.62
CLPTM1O96005 AL049812.1-201ENST00000432563 2267 ntBASIC18.94■□□□□ 0.62
CLPTM1O96005 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.94■□□□□ 0.62
CLPTM1O96005 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLPTM1O96005 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CLPTM1O96005 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CLPTM1O96005 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CLPTM1O96005 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLPTM1O96005 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLPTM1O96005 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.94■□□□□ 0.62
CLPTM1O96005 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLPTM1O96005 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.94■□□□□ 0.62
CLPTM1O96005 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.94■□□□□ 0.62
CLPTM1O96005 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLPTM1O96005 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLPTM1O96005 MIR939-201ENST00000401314 82 ntBASIC18.94■□□□□ 0.62
CLPTM1O96005 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLPTM1O96005 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLPTM1O96005 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
CLPTM1O96005 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.94■□□□□ 0.62
CLPTM1O96005 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.94■□□□□ 0.62
CLPTM1O96005 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CLPTM1O96005 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CLPTM1O96005 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CLPTM1O96005 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLPTM1O96005 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLPTM1O96005 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.94■□□□□ 0.62
CLPTM1O96005 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLPTM1O96005 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLPTM1O96005 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
CLPTM1O96005 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CLPTM1O96005 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.93■□□□□ 0.62
CLPTM1O96005 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLPTM1O96005 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLPTM1O96005 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CLPTM1O96005 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLPTM1O96005 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLPTM1O96005 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLPTM1O96005 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CLPTM1O96005 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.93■□□□□ 0.62
CLPTM1O96005 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.93■□□□□ 0.62
CLPTM1O96005 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLPTM1O96005 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
CLPTM1O96005 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms