Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.27■□□□□ 0.83
VAPBO95292 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
VAPBO95292 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.26■□□□□ 0.83
VAPBO95292 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
VAPBO95292 AC007952.6-201ENST00000573168 2673 ntBASIC20.26■□□□□ 0.83
VAPBO95292 AC003957.1-201ENST00000625108 2673 ntBASIC20.26■□□□□ 0.83
VAPBO95292 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
VAPBO95292 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.26■□□□□ 0.83
VAPBO95292 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VAPBO95292 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VAPBO95292 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VAPBO95292 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
VAPBO95292 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.26■□□□□ 0.83
VAPBO95292 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.26■□□□□ 0.83
VAPBO95292 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.26■□□□□ 0.83
VAPBO95292 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
VAPBO95292 RARRES2P4-201ENST00000514074 484 ntBASIC20.26■□□□□ 0.83
VAPBO95292 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.26■□□□□ 0.83
VAPBO95292 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
VAPBO95292 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
VAPBO95292 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.26■□□□□ 0.83
VAPBO95292 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VAPBO95292 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
VAPBO95292 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VAPBO95292 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VAPBO95292 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
VAPBO95292 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VAPBO95292 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.25■□□□□ 0.83
VAPBO95292 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VAPBO95292 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VAPBO95292 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
VAPBO95292 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VAPBO95292 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.25■□□□□ 0.83
VAPBO95292 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VAPBO95292 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.25■□□□□ 0.83
VAPBO95292 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.25■□□□□ 0.83
VAPBO95292 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VAPBO95292 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
VAPBO95292 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
VAPBO95292 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
VAPBO95292 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VAPBO95292 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VAPBO95292 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.24■□□□□ 0.83
VAPBO95292 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.24■□□□□ 0.83
VAPBO95292 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.24■□□□□ 0.83
VAPBO95292 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.24■□□□□ 0.83
VAPBO95292 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
VAPBO95292 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.24■□□□□ 0.83
VAPBO95292 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.24■□□□□ 0.83
VAPBO95292 TCF3P1-201ENST00000423021 1937 ntBASIC20.24■□□□□ 0.83
VAPBO95292 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.24■□□□□ 0.83
VAPBO95292 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
VAPBO95292 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.24■□□□□ 0.83
VAPBO95292 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VAPBO95292 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.24■□□□□ 0.83
VAPBO95292 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VAPBO95292 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.24■□□□□ 0.83
VAPBO95292 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.24■□□□□ 0.83
VAPBO95292 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.24■□□□□ 0.83
VAPBO95292 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VAPBO95292 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
VAPBO95292 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VAPBO95292 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VAPBO95292 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.24■□□□□ 0.83
VAPBO95292 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
VAPBO95292 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
VAPBO95292 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VAPBO95292 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.23■□□□□ 0.83
VAPBO95292 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
VAPBO95292 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
VAPBO95292 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.23■□□□□ 0.83
VAPBO95292 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.23■□□□□ 0.83
VAPBO95292 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.23■□□□□ 0.83
VAPBO95292 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
VAPBO95292 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VAPBO95292 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.23■□□□□ 0.83
VAPBO95292 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VAPBO95292 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VAPBO95292 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
VAPBO95292 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
VAPBO95292 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VAPBO95292 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
VAPBO95292 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
VAPBO95292 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
VAPBO95292 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
VAPBO95292 MCRIP2P1-201ENST00000394346 511 ntBASIC20.22■□□□□ 0.83
VAPBO95292 AC007322.1-201ENST00000426983 750 ntBASIC20.22■□□□□ 0.83
VAPBO95292 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VAPBO95292 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VAPBO95292 AC231657.2-201ENST00000624556 255 ntBASIC20.22■□□□□ 0.83
VAPBO95292 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.22■□□□□ 0.83
VAPBO95292 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VAPBO95292 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VAPBO95292 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VAPBO95292 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.22■□□□□ 0.83
VAPBO95292 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
VAPBO95292 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.21■□□□□ 0.83
VAPBO95292 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
VAPBO95292 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
VAPBO95292 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms