Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTN3O95197 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTN3O95197 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTN3O95197 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTN3O95197 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RTN3O95197 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTN3O95197 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.25■□□□□ 0.99
RTN3O95197 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTN3O95197 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.25■□□□□ 0.99
RTN3O95197 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RTN3O95197 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTN3O95197 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RTN3O95197 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RTN3O95197 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTN3O95197 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RTN3O95197 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTN3O95197 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTN3O95197 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.25■□□□□ 0.99
RTN3O95197 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.25■□□□□ 0.99
RTN3O95197 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.25■□□□□ 0.99
RTN3O95197 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.25■□□□□ 0.99
RTN3O95197 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.25■□□□□ 0.99
RTN3O95197 AC005829.2-201ENST00000571422 1056 ntBASIC21.25■□□□□ 0.99
RTN3O95197 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.25■□□□□ 0.99
RTN3O95197 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RTN3O95197 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.25■□□□□ 0.99
RTN3O95197 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTN3O95197 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RTN3O95197 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
RTN3O95197 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTN3O95197 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTN3O95197 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTN3O95197 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.24■□□□□ 0.99
RTN3O95197 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RTN3O95197 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
RTN3O95197 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTN3O95197 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTN3O95197 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.24■□□□□ 0.99
RTN3O95197 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTN3O95197 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTN3O95197 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
RTN3O95197 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTN3O95197 AL390719.1-204ENST00000412397 1219 ntBASIC21.24■□□□□ 0.99
RTN3O95197 AC128676.1-201ENST00000454392 318 ntBASIC21.24■□□□□ 0.99
RTN3O95197 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.24■□□□□ 0.99
RTN3O95197 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.24■□□□□ 0.99
RTN3O95197 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RTN3O95197 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RTN3O95197 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
RTN3O95197 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.24■□□□□ 0.99
RTN3O95197 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
RTN3O95197 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.24■□□□□ 0.99
RTN3O95197 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTN3O95197 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.23■□□□□ 0.99
RTN3O95197 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
RTN3O95197 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTN3O95197 PRORSD1P-201ENST00000295112 541 ntBASIC21.23■□□□□ 0.99
RTN3O95197 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.23■□□□□ 0.99
RTN3O95197 KRT17P3-201ENST00000420566 1262 ntBASIC21.23■□□□□ 0.99
RTN3O95197 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTN3O95197 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RTN3O95197 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.23■□□□□ 0.99
RTN3O95197 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.23■□□□□ 0.99
RTN3O95197 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.23■□□□□ 0.99
RTN3O95197 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.23■□□□□ 0.99
RTN3O95197 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.23■□□□□ 0.99
RTN3O95197 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTN3O95197 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTN3O95197 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTN3O95197 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.23■□□□□ 0.99
RTN3O95197 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTN3O95197 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTN3O95197 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.23■□□□□ 0.99
RTN3O95197 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
RTN3O95197 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
RTN3O95197 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
RTN3O95197 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.22■□□□□ 0.99
RTN3O95197 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.22■□□□□ 0.99
RTN3O95197 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
RTN3O95197 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTN3O95197 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTN3O95197 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTN3O95197 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTN3O95197 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTN3O95197 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.22■□□□□ 0.99
RTN3O95197 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTN3O95197 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RTN3O95197 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTN3O95197 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTN3O95197 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RTN3O95197 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTN3O95197 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTN3O95197 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.21■□□□□ 0.99
RTN3O95197 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
RTN3O95197 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTN3O95197 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
RTN3O95197 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.21■□□□□ 0.99
RTN3O95197 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.21■□□□□ 0.99
RTN3O95197 AC023632.3-201ENST00000521633 145 ntBASIC21.21■□□□□ 0.99
RTN3O95197 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms