Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CCNKO75909 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.48■□□□□ 0.39
CCNKO75909 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCNKO75909 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCNKO75909 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCNKO75909 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCNKO75909 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CCNKO75909 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCNKO75909 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.48■□□□□ 0.39
CCNKO75909 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CCNKO75909 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCNKO75909 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CCNKO75909 MTX2-204ENST00000443241 799 ntTSL 3 BASIC17.48■□□□□ 0.39
CCNKO75909 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC17.48■□□□□ 0.39
CCNKO75909 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCNKO75909 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCNKO75909 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC17.48■□□□□ 0.39
CCNKO75909 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.48■□□□□ 0.39
CCNKO75909 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCNKO75909 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCNKO75909 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.48■□□□□ 0.39
CCNKO75909 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCNKO75909 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCNKO75909 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CCNKO75909 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.48■□□□□ 0.39
CCNKO75909 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCNKO75909 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
CCNKO75909 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.48■□□□□ 0.39
CCNKO75909 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCNKO75909 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.47■□□□□ 0.39
CCNKO75909 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCNKO75909 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCNKO75909 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCNKO75909 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCNKO75909 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.47■□□□□ 0.39
CCNKO75909 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCNKO75909 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.47■□□□□ 0.39
CCNKO75909 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCNKO75909 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC17.47■□□□□ 0.39
CCNKO75909 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCNKO75909 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CCNKO75909 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCNKO75909 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCNKO75909 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCNKO75909 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCNKO75909 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
CCNKO75909 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CCNKO75909 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCNKO75909 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCNKO75909 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
CCNKO75909 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCNKO75909 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCNKO75909 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCNKO75909 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCNKO75909 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCNKO75909 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCNKO75909 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.46■□□□□ 0.39
CCNKO75909 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.46■□□□□ 0.39
CCNKO75909 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.46■□□□□ 0.39
CCNKO75909 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.46■□□□□ 0.39
CCNKO75909 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCNKO75909 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCNKO75909 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC17.46■□□□□ 0.39
CCNKO75909 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.46■□□□□ 0.39
CCNKO75909 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCNKO75909 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCNKO75909 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.46■□□□□ 0.39
CCNKO75909 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCNKO75909 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.46■□□□□ 0.38
CCNKO75909 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CCNKO75909 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.45■□□□□ 0.38
CCNKO75909 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCNKO75909 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.45■□□□□ 0.38
CCNKO75909 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.45■□□□□ 0.38
CCNKO75909 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.45■□□□□ 0.38
CCNKO75909 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.45■□□□□ 0.38
CCNKO75909 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.45■□□□□ 0.38
CCNKO75909 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.45■□□□□ 0.38
CCNKO75909 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCNKO75909 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCNKO75909 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCNKO75909 RARRES2P2-201ENST00000394842 485 ntBASIC17.45■□□□□ 0.38
CCNKO75909 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCNKO75909 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCNKO75909 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCNKO75909 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCNKO75909 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CCNKO75909 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CCNKO75909 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCNKO75909 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCNKO75909 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.45■□□□□ 0.38
CCNKO75909 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCNKO75909 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.44■□□□□ 0.38
CCNKO75909 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCNKO75909 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
CCNKO75909 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCNKO75909 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
CCNKO75909 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.44■□□□□ 0.38
CCNKO75909 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.44■□□□□ 0.38
CCNKO75909 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms