Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.61■□□□□ 0.41
UPK1BO75841 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.6■□□□□ 0.41
UPK1BO75841 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UPK1BO75841 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UPK1BO75841 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
UPK1BO75841 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.6■□□□□ 0.41
UPK1BO75841 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC17.6■□□□□ 0.41
UPK1BO75841 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
UPK1BO75841 MIR6722-201ENST00000617286 78 ntBASIC17.6■□□□□ 0.41
UPK1BO75841 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UPK1BO75841 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UPK1BO75841 BX005040.4-201ENST00000637145 1518 ntBASIC17.6■□□□□ 0.41
UPK1BO75841 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.6■□□□□ 0.41
UPK1BO75841 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.6■□□□□ 0.41
UPK1BO75841 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
UPK1BO75841 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.6■□□□□ 0.41
UPK1BO75841 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
UPK1BO75841 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UPK1BO75841 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UPK1BO75841 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.6■□□□□ 0.41
UPK1BO75841 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UPK1BO75841 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
UPK1BO75841 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UPK1BO75841 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UPK1BO75841 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
UPK1BO75841 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UPK1BO75841 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UPK1BO75841 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UPK1BO75841 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
UPK1BO75841 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UPK1BO75841 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.59■□□□□ 0.41
UPK1BO75841 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.59■□□□□ 0.41
UPK1BO75841 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
UPK1BO75841 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
UPK1BO75841 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.59■□□□□ 0.41
UPK1BO75841 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UPK1BO75841 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UPK1BO75841 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.59■□□□□ 0.41
UPK1BO75841 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UPK1BO75841 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UPK1BO75841 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.58■□□□□ 0.41
UPK1BO75841 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.58■□□□□ 0.41
UPK1BO75841 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
UPK1BO75841 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.41
UPK1BO75841 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
UPK1BO75841 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
UPK1BO75841 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
UPK1BO75841 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
UPK1BO75841 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
UPK1BO75841 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.58■□□□□ 0.41
UPK1BO75841 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.58■□□□□ 0.41
UPK1BO75841 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UPK1BO75841 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UPK1BO75841 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
UPK1BO75841 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC17.58■□□□□ 0.4
UPK1BO75841 TK2-202ENST00000417693 1046 ntTSL 2 BASIC17.58■□□□□ 0.4
UPK1BO75841 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.58■□□□□ 0.4
UPK1BO75841 AC087239.1-201ENST00000622671 572 ntBASIC17.58■□□□□ 0.4
UPK1BO75841 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.58■□□□□ 0.4
UPK1BO75841 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
UPK1BO75841 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.58■□□□□ 0.4
UPK1BO75841 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UPK1BO75841 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.58■□□□□ 0.4
UPK1BO75841 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
UPK1BO75841 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
UPK1BO75841 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
UPK1BO75841 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
UPK1BO75841 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UPK1BO75841 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
UPK1BO75841 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.57■□□□□ 0.4
UPK1BO75841 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UPK1BO75841 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
UPK1BO75841 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.57■□□□□ 0.4
UPK1BO75841 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UPK1BO75841 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UPK1BO75841 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UPK1BO75841 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC17.57■□□□□ 0.4
UPK1BO75841 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
UPK1BO75841 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UPK1BO75841 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.57■□□□□ 0.4
UPK1BO75841 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.57■□□□□ 0.4
UPK1BO75841 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UPK1BO75841 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.57■□□□□ 0.4
UPK1BO75841 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.57■□□□□ 0.4
UPK1BO75841 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UPK1BO75841 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UPK1BO75841 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UPK1BO75841 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.57■□□□□ 0.4
UPK1BO75841 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.57■□□□□ 0.4
UPK1BO75841 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
UPK1BO75841 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UPK1BO75841 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UPK1BO75841 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UPK1BO75841 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UPK1BO75841 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UPK1BO75841 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
UPK1BO75841 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
UPK1BO75841 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UPK1BO75841 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UPK1BO75841 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms