Protein–RNA interactions for Protein: O75437

ZNF254, Zinc finger protein 254, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254O75437 AC026471.1-201ENST00000564629 3026 ntBASIC17.83■□□□□ 0.45
ZNF254O75437 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
ZNF254O75437 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
ZNF254O75437 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ZNF254O75437 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
ZNF254O75437 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
ZNF254O75437 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZNF254O75437 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZNF254O75437 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZNF254O75437 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.83■□□□□ 0.44
ZNF254O75437 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.83■□□□□ 0.44
ZNF254O75437 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZNF254O75437 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZNF254O75437 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ZNF254O75437 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZNF254O75437 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZNF254O75437 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZNF254O75437 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
ZNF254O75437 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.83■□□□□ 0.44
ZNF254O75437 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
ZNF254O75437 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF254O75437 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.82■□□□□ 0.44
ZNF254O75437 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF254O75437 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF254O75437 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF254O75437 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF254O75437 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF254O75437 AC019069.1-201ENST00000610008 1333 ntBASIC17.82■□□□□ 0.44
ZNF254O75437 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF254O75437 KRT19P1-201ENST00000405746 1186 ntBASIC17.82■□□□□ 0.44
ZNF254O75437 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
ZNF254O75437 CDV3P1-201ENST00000471403 739 ntBASIC17.82■□□□□ 0.44
ZNF254O75437 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF254O75437 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF254O75437 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF254O75437 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.82■□□□□ 0.44
ZNF254O75437 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF254O75437 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.82■□□□□ 0.44
ZNF254O75437 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.82■□□□□ 0.44
ZNF254O75437 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF254O75437 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.82■□□□□ 0.44
ZNF254O75437 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.82■□□□□ 0.44
ZNF254O75437 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
ZNF254O75437 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
ZNF254O75437 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF254O75437 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF254O75437 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF254O75437 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF254O75437 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.81■□□□□ 0.44
ZNF254O75437 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF254O75437 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.81■□□□□ 0.44
ZNF254O75437 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.81■□□□□ 0.44
ZNF254O75437 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF254O75437 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF254O75437 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF254O75437 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF254O75437 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF254O75437 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
ZNF254O75437 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
ZNF254O75437 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.81■□□□□ 0.44
ZNF254O75437 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.81■□□□□ 0.44
ZNF254O75437 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.81■□□□□ 0.44
ZNF254O75437 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.81■□□□□ 0.44
ZNF254O75437 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.81■□□□□ 0.44
ZNF254O75437 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
ZNF254O75437 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.81■□□□□ 0.44
ZNF254O75437 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF254O75437 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.81■□□□□ 0.44
ZNF254O75437 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.81■□□□□ 0.44
ZNF254O75437 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.81■□□□□ 0.44
ZNF254O75437 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF254O75437 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF254O75437 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
ZNF254O75437 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.81■□□□□ 0.44
ZNF254O75437 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.81■□□□□ 0.44
ZNF254O75437 AC004854.2-201ENST00000608450 1441 ntBASIC17.81■□□□□ 0.44
ZNF254O75437 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF254O75437 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
ZNF254O75437 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
ZNF254O75437 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
ZNF254O75437 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF254O75437 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF254O75437 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.8■□□□□ 0.44
ZNF254O75437 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF254O75437 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF254O75437 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.8■□□□□ 0.44
ZNF254O75437 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF254O75437 AC097381.1-201ENST00000429019 1296 ntBASIC17.8■□□□□ 0.44
ZNF254O75437 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.8■□□□□ 0.44
ZNF254O75437 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.8■□□□□ 0.44
ZNF254O75437 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.8■□□□□ 0.44
ZNF254O75437 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF254O75437 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF254O75437 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.8■□□□□ 0.44
ZNF254O75437 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
ZNF254O75437 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF254O75437 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
ZNF254O75437 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF254O75437 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.8■□□□□ 0.44
ZNF254O75437 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms