Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PFDN1O60925 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PFDN1O60925 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
PFDN1O60925 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PFDN1O60925 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PFDN1O60925 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PFDN1O60925 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PFDN1O60925 AC068880.1-201ENST00000507289 2297 ntBASIC18.09■□□□□ 0.49
PFDN1O60925 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PFDN1O60925 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PFDN1O60925 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PFDN1O60925 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.08■□□□□ 0.49
PFDN1O60925 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PFDN1O60925 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PFDN1O60925 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PFDN1O60925 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
PFDN1O60925 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
PFDN1O60925 AC007225.1-201ENST00000566331 1836 ntBASIC18.08■□□□□ 0.48
PFDN1O60925 AC018755.3-202ENST00000596210 929 ntBASIC18.08■□□□□ 0.48
PFDN1O60925 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PFDN1O60925 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PFDN1O60925 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PFDN1O60925 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PFDN1O60925 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PFDN1O60925 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PFDN1O60925 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
PFDN1O60925 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.08■□□□□ 0.48
PFDN1O60925 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PFDN1O60925 CROCCP1-201ENST00000426910 5675 ntBASIC18.08■□□□□ 0.48
PFDN1O60925 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PFDN1O60925 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
PFDN1O60925 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
PFDN1O60925 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PFDN1O60925 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PFDN1O60925 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PFDN1O60925 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
PFDN1O60925 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PFDN1O60925 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
PFDN1O60925 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PFDN1O60925 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PFDN1O60925 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PFDN1O60925 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PFDN1O60925 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.07■□□□□ 0.48
PFDN1O60925 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PFDN1O60925 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.07■□□□□ 0.48
PFDN1O60925 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
PFDN1O60925 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PFDN1O60925 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PFDN1O60925 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PFDN1O60925 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.07■□□□□ 0.48
PFDN1O60925 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.07■□□□□ 0.48
PFDN1O60925 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PFDN1O60925 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PFDN1O60925 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PFDN1O60925 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PFDN1O60925 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
PFDN1O60925 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PFDN1O60925 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
PFDN1O60925 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PFDN1O60925 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PFDN1O60925 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PFDN1O60925 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PFDN1O60925 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PFDN1O60925 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.06■□□□□ 0.48
PFDN1O60925 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.06■□□□□ 0.48
PFDN1O60925 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PFDN1O60925 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PFDN1O60925 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PFDN1O60925 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC18.06■□□□□ 0.48
PFDN1O60925 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
PFDN1O60925 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.06■□□□□ 0.48
PFDN1O60925 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.06■□□□□ 0.48
PFDN1O60925 MIR3665-201ENST00000578708 105 ntBASIC18.06■□□□□ 0.48
PFDN1O60925 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.06■□□□□ 0.48
PFDN1O60925 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PFDN1O60925 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PFDN1O60925 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PFDN1O60925 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.06■□□□□ 0.48
PFDN1O60925 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.06■□□□□ 0.48
PFDN1O60925 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
PFDN1O60925 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PFDN1O60925 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PFDN1O60925 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PFDN1O60925 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
PFDN1O60925 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PFDN1O60925 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PFDN1O60925 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PFDN1O60925 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PFDN1O60925 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PFDN1O60925 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PFDN1O60925 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
PFDN1O60925 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PFDN1O60925 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PFDN1O60925 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
PFDN1O60925 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PFDN1O60925 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.05■□□□□ 0.48
PFDN1O60925 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PFDN1O60925 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PFDN1O60925 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC18.05■□□□□ 0.48
PFDN1O60925 AC009113.1-201ENST00000570267 2443 ntBASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms