Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
KLHL41O60662 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
KLHL41O60662 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.96■□□□□ 0.79
KLHL41O60662 AC231657.2-201ENST00000624556 255 ntBASIC19.96■□□□□ 0.79
KLHL41O60662 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KLHL41O60662 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KLHL41O60662 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KLHL41O60662 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KLHL41O60662 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.96■□□□□ 0.79
KLHL41O60662 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
KLHL41O60662 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KLHL41O60662 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
KLHL41O60662 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.95■□□□□ 0.78
KLHL41O60662 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
KLHL41O60662 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
KLHL41O60662 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
KLHL41O60662 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
KLHL41O60662 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.95■□□□□ 0.78
KLHL41O60662 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.95■□□□□ 0.78
KLHL41O60662 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.95■□□□□ 0.78
KLHL41O60662 TCF3P1-201ENST00000423021 1937 ntBASIC19.95■□□□□ 0.78
KLHL41O60662 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.95■□□□□ 0.78
KLHL41O60662 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
KLHL41O60662 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
KLHL41O60662 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.95■□□□□ 0.78
KLHL41O60662 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KLHL41O60662 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KLHL41O60662 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KLHL41O60662 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
KLHL41O60662 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.95■□□□□ 0.78
KLHL41O60662 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
KLHL41O60662 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KLHL41O60662 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
KLHL41O60662 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KLHL41O60662 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
KLHL41O60662 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.94■□□□□ 0.78
KLHL41O60662 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KLHL41O60662 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.94■□□□□ 0.78
KLHL41O60662 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KLHL41O60662 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KLHL41O60662 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.94■□□□□ 0.78
KLHL41O60662 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.94■□□□□ 0.78
KLHL41O60662 AL109923.1-201ENST00000618799 583 ntBASIC19.94■□□□□ 0.78
KLHL41O60662 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KLHL41O60662 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
KLHL41O60662 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KLHL41O60662 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.94■□□□□ 0.78
KLHL41O60662 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KLHL41O60662 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.93■□□□□ 0.78
KLHL41O60662 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KLHL41O60662 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.93■□□□□ 0.78
KLHL41O60662 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.93■□□□□ 0.78
KLHL41O60662 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KLHL41O60662 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KLHL41O60662 NCF1B-203ENST00000435988 1254 ntBASIC19.93■□□□□ 0.78
KLHL41O60662 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KLHL41O60662 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.93■□□□□ 0.78
KLHL41O60662 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.93■□□□□ 0.78
KLHL41O60662 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
KLHL41O60662 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.93■□□□□ 0.78
KLHL41O60662 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
KLHL41O60662 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.93■□□□□ 0.78
KLHL41O60662 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.93■□□□□ 0.78
KLHL41O60662 AC092720.2-201ENST00000602388 1665 ntBASIC19.93■□□□□ 0.78
KLHL41O60662 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
KLHL41O60662 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.93■□□□□ 0.78
KLHL41O60662 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
KLHL41O60662 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
KLHL41O60662 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KLHL41O60662 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KLHL41O60662 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
KLHL41O60662 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.92■□□□□ 0.78
KLHL41O60662 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
KLHL41O60662 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.92■□□□□ 0.78
KLHL41O60662 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KLHL41O60662 GPX1P1-201ENST00000388829 606 ntBASIC19.92■□□□□ 0.78
KLHL41O60662 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
KLHL41O60662 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KLHL41O60662 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.92■□□□□ 0.78
KLHL41O60662 AC104771.1-201ENST00000603335 964 ntBASIC19.92■□□□□ 0.78
KLHL41O60662 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
KLHL41O60662 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.92■□□□□ 0.78
KLHL41O60662 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
KLHL41O60662 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
KLHL41O60662 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KLHL41O60662 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KLHL41O60662 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
KLHL41O60662 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KLHL41O60662 SMG8-203ENST00000578922 2178 ntBASIC19.91■□□□□ 0.78
KLHL41O60662 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KLHL41O60662 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
KLHL41O60662 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
KLHL41O60662 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
KLHL41O60662 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
KLHL41O60662 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.91■□□□□ 0.78
KLHL41O60662 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
KLHL41O60662 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.91■□□□□ 0.78
KLHL41O60662 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.91■□□□□ 0.78
KLHL41O60662 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.91■□□□□ 0.78
KLHL41O60662 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms