Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 KRT17P3-201ENST00000420566 1262 ntBASIC20.8■□□□□ 0.92
TSPAN3O60637 AL158047.1-201ENST00000445918 881 ntBASIC20.8■□□□□ 0.92
TSPAN3O60637 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TSPAN3O60637 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.8■□□□□ 0.92
TSPAN3O60637 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.8■□□□□ 0.92
TSPAN3O60637 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.8■□□□□ 0.92
TSPAN3O60637 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TSPAN3O60637 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
TSPAN3O60637 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.8■□□□□ 0.92
TSPAN3O60637 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
TSPAN3O60637 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.8■□□□□ 0.92
TSPAN3O60637 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TSPAN3O60637 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.8■□□□□ 0.92
TSPAN3O60637 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TSPAN3O60637 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.8■□□□□ 0.92
TSPAN3O60637 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TSPAN3O60637 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TSPAN3O60637 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TSPAN3O60637 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.79■□□□□ 0.92
TSPAN3O60637 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
TSPAN3O60637 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TSPAN3O60637 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TSPAN3O60637 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TSPAN3O60637 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TSPAN3O60637 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TSPAN3O60637 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.79■□□□□ 0.92
TSPAN3O60637 RPS2P52-201ENST00000469610 820 ntBASIC20.79■□□□□ 0.92
TSPAN3O60637 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
TSPAN3O60637 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
TSPAN3O60637 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.79■□□□□ 0.92
TSPAN3O60637 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.79■□□□□ 0.92
TSPAN3O60637 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.79■□□□□ 0.92
TSPAN3O60637 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.79■□□□□ 0.92
TSPAN3O60637 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.79■□□□□ 0.92
TSPAN3O60637 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
TSPAN3O60637 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TSPAN3O60637 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TSPAN3O60637 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.78■□□□□ 0.92
TSPAN3O60637 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.78■□□□□ 0.92
TSPAN3O60637 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TSPAN3O60637 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TSPAN3O60637 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TSPAN3O60637 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TSPAN3O60637 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TSPAN3O60637 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.78■□□□□ 0.92
TSPAN3O60637 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
TSPAN3O60637 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TSPAN3O60637 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.78■□□□□ 0.92
TSPAN3O60637 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.78■□□□□ 0.92
TSPAN3O60637 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.78■□□□□ 0.92
TSPAN3O60637 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TSPAN3O60637 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TSPAN3O60637 AC142381.4-202ENST00000563973 229 ntBASIC20.78■□□□□ 0.92
TSPAN3O60637 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
TSPAN3O60637 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.78■□□□□ 0.92
TSPAN3O60637 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.78■□□□□ 0.92
TSPAN3O60637 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TSPAN3O60637 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.78■□□□□ 0.92
TSPAN3O60637 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TSPAN3O60637 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TSPAN3O60637 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TSPAN3O60637 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.77■□□□□ 0.92
TSPAN3O60637 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
TSPAN3O60637 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TSPAN3O60637 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
TSPAN3O60637 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
TSPAN3O60637 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TSPAN3O60637 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TSPAN3O60637 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TSPAN3O60637 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.77■□□□□ 0.92
TSPAN3O60637 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.77■□□□□ 0.92
TSPAN3O60637 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.77■□□□□ 0.92
TSPAN3O60637 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TSPAN3O60637 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.77■□□□□ 0.92
TSPAN3O60637 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.77■□□□□ 0.92
TSPAN3O60637 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TSPAN3O60637 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
TSPAN3O60637 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TSPAN3O60637 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.76■□□□□ 0.91
TSPAN3O60637 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TSPAN3O60637 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TSPAN3O60637 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TSPAN3O60637 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TSPAN3O60637 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
TSPAN3O60637 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TSPAN3O60637 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TSPAN3O60637 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.76■□□□□ 0.91
TSPAN3O60637 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TSPAN3O60637 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.76■□□□□ 0.91
TSPAN3O60637 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.76■□□□□ 0.91
TSPAN3O60637 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
TSPAN3O60637 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TSPAN3O60637 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TSPAN3O60637 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TSPAN3O60637 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TSPAN3O60637 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
TSPAN3O60637 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
TSPAN3O60637 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
TSPAN3O60637 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.75■□□□□ 0.91
TSPAN3O60637 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms