Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDH7O60245 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDH7O60245 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDH7O60245 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PCDH7O60245 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH7O60245 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PCDH7O60245 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PCDH7O60245 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
PCDH7O60245 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDH7O60245 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.27■□□□□ 0.67
PCDH7O60245 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH7O60245 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDH7O60245 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH7O60245 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH7O60245 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH7O60245 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDH7O60245 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH7O60245 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH7O60245 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH7O60245 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH7O60245 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH7O60245 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH7O60245 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.26■□□□□ 0.67
PCDH7O60245 AFG3L1P-217ENST00000557444 2447 ntBASIC19.26■□□□□ 0.67
PCDH7O60245 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH7O60245 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
PCDH7O60245 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDH7O60245 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDH7O60245 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH7O60245 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH7O60245 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDH7O60245 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
PCDH7O60245 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH7O60245 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PCDH7O60245 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH7O60245 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH7O60245 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH7O60245 CYP2T1P-201ENST00000432607 1285 ntBASIC19.25■□□□□ 0.67
PCDH7O60245 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDH7O60245 AC022517.1-201ENST00000592429 346 ntBASIC19.25■□□□□ 0.67
PCDH7O60245 AC231657.2-201ENST00000624556 255 ntBASIC19.25■□□□□ 0.67
PCDH7O60245 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.25■□□□□ 0.67
PCDH7O60245 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH7O60245 TCF3P1-201ENST00000423021 1937 ntBASIC19.25■□□□□ 0.67
PCDH7O60245 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH7O60245 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH7O60245 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH7O60245 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.25■□□□□ 0.67
PCDH7O60245 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH7O60245 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH7O60245 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDH7O60245 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH7O60245 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PCDH7O60245 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH7O60245 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PCDH7O60245 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH7O60245 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH7O60245 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH7O60245 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH7O60245 MCRIP2P1-201ENST00000394346 511 ntBASIC19.24■□□□□ 0.67
PCDH7O60245 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.24■□□□□ 0.67
PCDH7O60245 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH7O60245 AC100791.3-201ENST00000617619 330 ntBASIC19.24■□□□□ 0.67
PCDH7O60245 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDH7O60245 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDH7O60245 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
PCDH7O60245 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDH7O60245 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDH7O60245 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH7O60245 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH7O60245 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDH7O60245 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH7O60245 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH7O60245 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH7O60245 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH7O60245 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH7O60245 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH7O60245 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.23■□□□□ 0.67
PCDH7O60245 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH7O60245 AC007322.1-201ENST00000426983 750 ntBASIC19.23■□□□□ 0.67
PCDH7O60245 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH7O60245 AC069236.1-201ENST00000604339 616 ntBASIC19.23■□□□□ 0.67
PCDH7O60245 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDH7O60245 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH7O60245 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDH7O60245 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH7O60245 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
PCDH7O60245 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDH7O60245 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDH7O60245 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH7O60245 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDH7O60245 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.23■□□□□ 0.67
PCDH7O60245 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH7O60245 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
PCDH7O60245 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH7O60245 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH7O60245 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH7O60245 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH7O60245 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH7O60245 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms