Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.43■□□□□ 0.86
SMAD6O43541 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.43■□□□□ 0.86
SMAD6O43541 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.43■□□□□ 0.86
SMAD6O43541 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.43■□□□□ 0.86
SMAD6O43541 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SMAD6O43541 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.43■□□□□ 0.86
SMAD6O43541 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMAD6O43541 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMAD6O43541 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMAD6O43541 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SMAD6O43541 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.42■□□□□ 0.86
SMAD6O43541 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMAD6O43541 DPP3P2-201ENST00000416030 1696 ntBASIC20.42■□□□□ 0.86
SMAD6O43541 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.42■□□□□ 0.86
SMAD6O43541 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.42■□□□□ 0.86
SMAD6O43541 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMAD6O43541 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.42■□□□□ 0.86
SMAD6O43541 AL390719.1-204ENST00000412397 1219 ntBASIC20.42■□□□□ 0.86
SMAD6O43541 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SMAD6O43541 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.42■□□□□ 0.86
SMAD6O43541 AC023632.3-201ENST00000521633 145 ntBASIC20.42■□□□□ 0.86
SMAD6O43541 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.42■□□□□ 0.86
SMAD6O43541 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
SMAD6O43541 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.42■□□□□ 0.86
SMAD6O43541 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMAD6O43541 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMAD6O43541 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMAD6O43541 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMAD6O43541 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.42■□□□□ 0.86
SMAD6O43541 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.42■□□□□ 0.86
SMAD6O43541 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMAD6O43541 AC092720.2-201ENST00000602388 1665 ntBASIC20.42■□□□□ 0.86
SMAD6O43541 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMAD6O43541 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMAD6O43541 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMAD6O43541 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.41■□□□□ 0.86
SMAD6O43541 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SMAD6O43541 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
SMAD6O43541 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMAD6O43541 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMAD6O43541 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMAD6O43541 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMAD6O43541 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SMAD6O43541 POM121L13P-201ENST00000422362 380 ntBASIC20.41■□□□□ 0.86
SMAD6O43541 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.41■□□□□ 0.86
SMAD6O43541 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SMAD6O43541 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.41■□□□□ 0.86
SMAD6O43541 AC120498.8-201ENST00000614275 531 ntBASIC20.41■□□□□ 0.86
SMAD6O43541 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMAD6O43541 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.41■□□□□ 0.86
SMAD6O43541 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SMAD6O43541 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMAD6O43541 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.41■□□□□ 0.86
SMAD6O43541 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
SMAD6O43541 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SMAD6O43541 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMAD6O43541 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMAD6O43541 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.4■□□□□ 0.86
SMAD6O43541 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SMAD6O43541 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
SMAD6O43541 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
SMAD6O43541 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
SMAD6O43541 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.4■□□□□ 0.86
SMAD6O43541 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.4■□□□□ 0.86
SMAD6O43541 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
SMAD6O43541 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SMAD6O43541 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMAD6O43541 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
SMAD6O43541 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SMAD6O43541 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
SMAD6O43541 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.39■□□□□ 0.86
SMAD6O43541 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SMAD6O43541 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
SMAD6O43541 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SMAD6O43541 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMAD6O43541 KRT17P3-201ENST00000420566 1262 ntBASIC20.39■□□□□ 0.85
SMAD6O43541 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.39■□□□□ 0.85
SMAD6O43541 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMAD6O43541 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.39■□□□□ 0.85
SMAD6O43541 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SMAD6O43541 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMAD6O43541 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMAD6O43541 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
SMAD6O43541 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMAD6O43541 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SMAD6O43541 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.38■□□□□ 0.85
SMAD6O43541 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SMAD6O43541 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SMAD6O43541 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
SMAD6O43541 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
SMAD6O43541 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SMAD6O43541 AC069544.1-201ENST00000609399 999 ntBASIC20.38■□□□□ 0.85
SMAD6O43541 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.38■□□□□ 0.85
SMAD6O43541 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SMAD6O43541 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMAD6O43541 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
SMAD6O43541 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMAD6O43541 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMAD6O43541 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMAD6O43541 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms