Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLOCKO15516 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLOCKO15516 AL354811.1-201ENST00000610286 706 ntBASIC19.08■□□□□ 0.64
CLOCKO15516 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.08■□□□□ 0.64
CLOCKO15516 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLOCKO15516 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLOCKO15516 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.08■□□□□ 0.64
CLOCKO15516 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLOCKO15516 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.08■□□□□ 0.64
CLOCKO15516 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.08■□□□□ 0.64
CLOCKO15516 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.08■□□□□ 0.64
CLOCKO15516 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.08■□□□□ 0.64
CLOCKO15516 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
CLOCKO15516 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLOCKO15516 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CLOCKO15516 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLOCKO15516 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLOCKO15516 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CLOCKO15516 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.07■□□□□ 0.64
CLOCKO15516 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLOCKO15516 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLOCKO15516 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.07■□□□□ 0.64
CLOCKO15516 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLOCKO15516 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLOCKO15516 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
CLOCKO15516 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLOCKO15516 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLOCKO15516 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.07■□□□□ 0.64
CLOCKO15516 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CLOCKO15516 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CLOCKO15516 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CLOCKO15516 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLOCKO15516 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
CLOCKO15516 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.06■□□□□ 0.64
CLOCKO15516 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLOCKO15516 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLOCKO15516 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.06■□□□□ 0.64
CLOCKO15516 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CLOCKO15516 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.06■□□□□ 0.64
CLOCKO15516 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLOCKO15516 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.06■□□□□ 0.64
CLOCKO15516 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.06■□□□□ 0.64
CLOCKO15516 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLOCKO15516 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLOCKO15516 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLOCKO15516 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CLOCKO15516 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.06■□□□□ 0.64
CLOCKO15516 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLOCKO15516 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLOCKO15516 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLOCKO15516 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLOCKO15516 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLOCKO15516 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.05■□□□□ 0.64
CLOCKO15516 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CLOCKO15516 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLOCKO15516 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLOCKO15516 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLOCKO15516 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLOCKO15516 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.05■□□□□ 0.64
CLOCKO15516 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLOCKO15516 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.05■□□□□ 0.64
CLOCKO15516 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLOCKO15516 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.05■□□□□ 0.64
CLOCKO15516 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLOCKO15516 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.05■□□□□ 0.64
CLOCKO15516 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.05■□□□□ 0.64
CLOCKO15516 AC027612.3-201ENST00000413684 1047 ntBASIC19.05■□□□□ 0.64
CLOCKO15516 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLOCKO15516 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.05■□□□□ 0.64
CLOCKO15516 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLOCKO15516 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.05■□□□□ 0.64
CLOCKO15516 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.05■□□□□ 0.64
CLOCKO15516 AC105233.4-201ENST00000642045 216 ntBASIC19.05■□□□□ 0.64
CLOCKO15516 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
CLOCKO15516 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.05■□□□□ 0.64
CLOCKO15516 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLOCKO15516 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLOCKO15516 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CLOCKO15516 AC138932.1-201ENST00000534164 6830 ntBASIC19.05■□□□□ 0.64
CLOCKO15516 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
CLOCKO15516 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLOCKO15516 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CLOCKO15516 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.05■□□□□ 0.64
CLOCKO15516 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.04■□□□□ 0.64
CLOCKO15516 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLOCKO15516 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CLOCKO15516 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLOCKO15516 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLOCKO15516 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLOCKO15516 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CLOCKO15516 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CLOCKO15516 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.04■□□□□ 0.64
CLOCKO15516 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.04■□□□□ 0.64
CLOCKO15516 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.04■□□□□ 0.64
CLOCKO15516 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.04■□□□□ 0.64
CLOCKO15516 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.04■□□□□ 0.64
CLOCKO15516 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLOCKO15516 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.04■□□□□ 0.64
CLOCKO15516 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLOCKO15516 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms