Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 MCRIP2P1-201ENST00000394346 511 ntBASIC20.18■□□□□ 0.82
PFDN6O15212 MIR935-201ENST00000401179 91 ntBASIC20.18■□□□□ 0.82
PFDN6O15212 CNN2P6-201ENST00000439038 900 ntBASIC20.18■□□□□ 0.82
PFDN6O15212 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PFDN6O15212 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.18■□□□□ 0.82
PFDN6O15212 AC016405.3-201ENST00000607710 860 ntBASIC20.18■□□□□ 0.82
PFDN6O15212 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.18■□□□□ 0.82
PFDN6O15212 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
PFDN6O15212 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PFDN6O15212 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PFDN6O15212 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PFDN6O15212 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PFDN6O15212 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PFDN6O15212 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.17■□□□□ 0.82
PFDN6O15212 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PFDN6O15212 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PFDN6O15212 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.17■□□□□ 0.82
PFDN6O15212 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PFDN6O15212 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PFDN6O15212 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
PFDN6O15212 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PFDN6O15212 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.17■□□□□ 0.82
PFDN6O15212 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.17■□□□□ 0.82
PFDN6O15212 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.17■□□□□ 0.82
PFDN6O15212 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.17■□□□□ 0.82
PFDN6O15212 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PFDN6O15212 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PFDN6O15212 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
PFDN6O15212 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.17■□□□□ 0.82
PFDN6O15212 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
PFDN6O15212 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PFDN6O15212 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
PFDN6O15212 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
PFDN6O15212 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PFDN6O15212 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PFDN6O15212 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.16■□□□□ 0.82
PFDN6O15212 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.16■□□□□ 0.82
PFDN6O15212 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PFDN6O15212 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
PFDN6O15212 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.16■□□□□ 0.82
PFDN6O15212 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.16■□□□□ 0.82
PFDN6O15212 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
PFDN6O15212 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PFDN6O15212 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.16■□□□□ 0.82
PFDN6O15212 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PFDN6O15212 AL137784.2-201ENST00000607332 1000 ntBASIC20.16■□□□□ 0.82
PFDN6O15212 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
PFDN6O15212 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PFDN6O15212 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.16■□□□□ 0.82
PFDN6O15212 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PFDN6O15212 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.16■□□□□ 0.82
PFDN6O15212 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PFDN6O15212 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PFDN6O15212 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PFDN6O15212 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PFDN6O15212 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.16■□□□□ 0.82
PFDN6O15212 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PFDN6O15212 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PFDN6O15212 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PFDN6O15212 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.15■□□□□ 0.82
PFDN6O15212 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PFDN6O15212 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PFDN6O15212 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PFDN6O15212 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PFDN6O15212 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
PFDN6O15212 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.15■□□□□ 0.82
PFDN6O15212 OR10C1-204ENST00000622521 1039 ntBASIC20.15■□□□□ 0.82
PFDN6O15212 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
PFDN6O15212 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PFDN6O15212 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PFDN6O15212 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.15■□□□□ 0.82
PFDN6O15212 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PFDN6O15212 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PFDN6O15212 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PFDN6O15212 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
PFDN6O15212 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PFDN6O15212 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PFDN6O15212 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
PFDN6O15212 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PFDN6O15212 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PFDN6O15212 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
PFDN6O15212 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PFDN6O15212 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PFDN6O15212 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PFDN6O15212 HCG11-201ENST00000411553 5696 ntBASIC20.14■□□□□ 0.81
PFDN6O15212 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.14■□□□□ 0.81
PFDN6O15212 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PFDN6O15212 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PFDN6O15212 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PFDN6O15212 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PFDN6O15212 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PFDN6O15212 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PFDN6O15212 CYP2T1P-201ENST00000432607 1285 ntBASIC20.14■□□□□ 0.81
PFDN6O15212 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.14■□□□□ 0.81
PFDN6O15212 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PFDN6O15212 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PFDN6O15212 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PFDN6O15212 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PFDN6O15212 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PFDN6O15212 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms