Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFA4O00483 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFA4O00483 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC15.49■□□□□ 0.07
NDUFA4O00483 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFA4O00483 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC15.49■□□□□ 0.07
NDUFA4O00483 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
NDUFA4O00483 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
NDUFA4O00483 LSM12P1-201ENST00000411836 588 ntBASIC15.49■□□□□ 0.07
NDUFA4O00483 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC15.49■□□□□ 0.07
NDUFA4O00483 OAS3-207ENST00000551007 998 ntTSL 2 BASIC15.49■□□□□ 0.07
NDUFA4O00483 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC15.49■□□□□ 0.07
NDUFA4O00483 BRWD1-AS2-201ENST00000603064 1028 ntBASIC15.49■□□□□ 0.07
NDUFA4O00483 AL121832.2-201ENST00000610979 668 ntBASIC15.49■□□□□ 0.07
NDUFA4O00483 AL050303.2-201ENST00000619798 666 ntBASIC15.49■□□□□ 0.07
NDUFA4O00483 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
NDUFA4O00483 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFA4O00483 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
NDUFA4O00483 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFA4O00483 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
NDUFA4O00483 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC15.49■□□□□ 0.07
NDUFA4O00483 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFA4O00483 STX6-204ENST00000542060 4809 ntTSL 2 BASIC15.49■□□□□ 0.07
NDUFA4O00483 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC15.49■□□□□ 0.07
NDUFA4O00483 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFA4O00483 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFA4O00483 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFA4O00483 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFA4O00483 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NDUFA4O00483 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NDUFA4O00483 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
NDUFA4O00483 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
NDUFA4O00483 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NDUFA4O00483 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC15.48■□□□□ 0.07
NDUFA4O00483 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NDUFA4O00483 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NDUFA4O00483 SMG8-203ENST00000578922 2178 ntBASIC15.48■□□□□ 0.07
NDUFA4O00483 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC15.48■□□□□ 0.07
NDUFA4O00483 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC15.48■□□□□ 0.07
NDUFA4O00483 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC15.48■□□□□ 0.07
NDUFA4O00483 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC15.48■□□□□ 0.07
NDUFA4O00483 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC15.48■□□□□ 0.07
NDUFA4O00483 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC15.48■□□□□ 0.07
NDUFA4O00483 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC15.48■□□□□ 0.07
NDUFA4O00483 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NDUFA4O00483 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NDUFA4O00483 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC15.48■□□□□ 0.07
NDUFA4O00483 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC15.48■□□□□ 0.07
NDUFA4O00483 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NDUFA4O00483 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC15.48■□□□□ 0.07
NDUFA4O00483 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NDUFA4O00483 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
NDUFA4O00483 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC15.47■□□□□ 0.07
NDUFA4O00483 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NDUFA4O00483 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
NDUFA4O00483 NXN-202ENST00000537628 1340 ntTSL 3 BASIC15.47■□□□□ 0.07
NDUFA4O00483 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC15.47■□□□□ 0.07
NDUFA4O00483 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NDUFA4O00483 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
NDUFA4O00483 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NDUFA4O00483 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC15.47■□□□□ 0.07
NDUFA4O00483 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC15.47■□□□□ 0.07
NDUFA4O00483 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NDUFA4O00483 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC15.47■□□□□ 0.07
NDUFA4O00483 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NDUFA4O00483 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC15.47■□□□□ 0.07
NDUFA4O00483 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NDUFA4O00483 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC15.47■□□□□ 0.07
NDUFA4O00483 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
NDUFA4O00483 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
NDUFA4O00483 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
NDUFA4O00483 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC15.47■□□□□ 0.07
NDUFA4O00483 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC15.47■□□□□ 0.07
NDUFA4O00483 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NDUFA4O00483 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NDUFA4O00483 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NDUFA4O00483 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
NDUFA4O00483 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
NDUFA4O00483 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC15.46■□□□□ 0.07
NDUFA4O00483 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC15.46■□□□□ 0.07
NDUFA4O00483 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NDUFA4O00483 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NDUFA4O00483 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NDUFA4O00483 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
NDUFA4O00483 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NDUFA4O00483 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NDUFA4O00483 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NDUFA4O00483 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NDUFA4O00483 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NDUFA4O00483 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
NDUFA4O00483 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.07
NDUFA4O00483 PPP1R14BP3-201ENST00000509033 445 ntBASIC15.46■□□□□ 0.07
NDUFA4O00483 AC083906.2-201ENST00000511578 360 ntBASIC15.46■□□□□ 0.07
NDUFA4O00483 PHB2-213ENST00000546111 858 ntTSL 2 BASIC15.46■□□□□ 0.07
NDUFA4O00483 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC15.46■□□□□ 0.07
NDUFA4O00483 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC15.46■□□□□ 0.07
NDUFA4O00483 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC15.46■□□□□ 0.07
NDUFA4O00483 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
NDUFA4O00483 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
NDUFA4O00483 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NDUFA4O00483 KRT17P1-201ENST00000399211 1546 ntBASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms