Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTCAO00442 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTCAO00442 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RTCAO00442 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTCAO00442 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
RTCAO00442 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTCAO00442 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.25■□□□□ 0.67
RTCAO00442 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.25■□□□□ 0.67
RTCAO00442 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTCAO00442 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTCAO00442 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RTCAO00442 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.25■□□□□ 0.67
RTCAO00442 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.25■□□□□ 0.67
RTCAO00442 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RTCAO00442 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
RTCAO00442 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.25■□□□□ 0.67
RTCAO00442 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.25■□□□□ 0.67
RTCAO00442 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.25■□□□□ 0.67
RTCAO00442 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.25■□□□□ 0.67
RTCAO00442 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTCAO00442 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.25■□□□□ 0.67
RTCAO00442 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.25■□□□□ 0.67
RTCAO00442 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTCAO00442 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.25■□□□□ 0.67
RTCAO00442 AL121832.2-201ENST00000610979 668 ntBASIC19.25■□□□□ 0.67
RTCAO00442 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.25■□□□□ 0.67
RTCAO00442 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.25■□□□□ 0.67
RTCAO00442 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.25■□□□□ 0.67
RTCAO00442 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTCAO00442 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.25■□□□□ 0.67
RTCAO00442 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTCAO00442 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTCAO00442 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.24■□□□□ 0.67
RTCAO00442 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RTCAO00442 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
RTCAO00442 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.24■□□□□ 0.67
RTCAO00442 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.24■□□□□ 0.67
RTCAO00442 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTCAO00442 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RTCAO00442 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RTCAO00442 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.24■□□□□ 0.67
RTCAO00442 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
RTCAO00442 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.24■□□□□ 0.67
RTCAO00442 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTCAO00442 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RTCAO00442 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTCAO00442 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTCAO00442 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.24■□□□□ 0.67
RTCAO00442 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.24■□□□□ 0.67
RTCAO00442 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.24■□□□□ 0.67
RTCAO00442 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RTCAO00442 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.24■□□□□ 0.67
RTCAO00442 AC099778.1-201ENST00000568593 1911 ntBASIC19.23■□□□□ 0.67
RTCAO00442 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
RTCAO00442 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.23■□□□□ 0.67
RTCAO00442 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTCAO00442 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.23■□□□□ 0.67
RTCAO00442 BX276092.2-201ENST00000417668 665 ntBASIC19.23■□□□□ 0.67
RTCAO00442 NCF1B-203ENST00000435988 1254 ntBASIC19.23■□□□□ 0.67
RTCAO00442 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.23■□□□□ 0.67
RTCAO00442 AL589743.5-201ENST00000616611 1050 ntBASIC19.23■□□□□ 0.67
RTCAO00442 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTCAO00442 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.23■□□□□ 0.67
RTCAO00442 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.23■□□□□ 0.67
RTCAO00442 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTCAO00442 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTCAO00442 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.23■□□□□ 0.67
RTCAO00442 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTCAO00442 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RTCAO00442 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTCAO00442 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTCAO00442 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.23■□□□□ 0.67
RTCAO00442 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTCAO00442 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.22■□□□□ 0.67
RTCAO00442 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.22■□□□□ 0.67
RTCAO00442 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.22■□□□□ 0.67
RTCAO00442 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
RTCAO00442 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RTCAO00442 LSM12P1-201ENST00000411836 588 ntBASIC19.22■□□□□ 0.67
RTCAO00442 GUSBP6-202ENST00000438529 1198 ntBASIC19.22■□□□□ 0.67
RTCAO00442 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.22■□□□□ 0.67
RTCAO00442 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.22■□□□□ 0.67
RTCAO00442 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.22■□□□□ 0.67
RTCAO00442 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.22■□□□□ 0.67
RTCAO00442 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RTCAO00442 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RTCAO00442 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
RTCAO00442 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTCAO00442 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTCAO00442 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RTCAO00442 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RTCAO00442 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RTCAO00442 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.22■□□□□ 0.67
RTCAO00442 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
RTCAO00442 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTCAO00442 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.21■□□□□ 0.67
RTCAO00442 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.21■□□□□ 0.67
RTCAO00442 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.21■□□□□ 0.67
RTCAO00442 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RTCAO00442 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms