Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDLIM1O00151 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDLIM1O00151 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDLIM1O00151 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDLIM1O00151 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDLIM1O00151 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.14■□□□□ 0.65
PDLIM1O00151 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDLIM1O00151 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PDLIM1O00151 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PDLIM1O00151 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PDLIM1O00151 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDLIM1O00151 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PDLIM1O00151 AL354811.1-201ENST00000610286 706 ntBASIC19.13■□□□□ 0.65
PDLIM1O00151 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PDLIM1O00151 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PDLIM1O00151 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDLIM1O00151 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.13■□□□□ 0.65
PDLIM1O00151 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.13■□□□□ 0.65
PDLIM1O00151 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDLIM1O00151 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.13■□□□□ 0.65
PDLIM1O00151 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDLIM1O00151 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PDLIM1O00151 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PDLIM1O00151 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PDLIM1O00151 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.13■□□□□ 0.65
PDLIM1O00151 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDLIM1O00151 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
PDLIM1O00151 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDLIM1O00151 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDLIM1O00151 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PDLIM1O00151 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PDLIM1O00151 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDLIM1O00151 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PDLIM1O00151 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDLIM1O00151 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDLIM1O00151 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.12■□□□□ 0.65
PDLIM1O00151 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.12■□□□□ 0.65
PDLIM1O00151 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
PDLIM1O00151 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
PDLIM1O00151 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.12■□□□□ 0.65
PDLIM1O00151 AC105233.4-201ENST00000642045 216 ntBASIC19.12■□□□□ 0.65
PDLIM1O00151 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDLIM1O00151 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDLIM1O00151 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.12■□□□□ 0.65
PDLIM1O00151 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PDLIM1O00151 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDLIM1O00151 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.11■□□□□ 0.65
PDLIM1O00151 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDLIM1O00151 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.11■□□□□ 0.65
PDLIM1O00151 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PDLIM1O00151 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDLIM1O00151 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.11■□□□□ 0.65
PDLIM1O00151 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PDLIM1O00151 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDLIM1O00151 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.11■□□□□ 0.65
PDLIM1O00151 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDLIM1O00151 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDLIM1O00151 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDLIM1O00151 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDLIM1O00151 AC027612.3-201ENST00000413684 1047 ntBASIC19.11■□□□□ 0.65
PDLIM1O00151 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.11■□□□□ 0.65
PDLIM1O00151 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.11■□□□□ 0.65
PDLIM1O00151 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.11■□□□□ 0.65
PDLIM1O00151 SMUG1P1-201ENST00000590640 811 ntBASIC19.11■□□□□ 0.65
PDLIM1O00151 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.11■□□□□ 0.65
PDLIM1O00151 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDLIM1O00151 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PDLIM1O00151 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDLIM1O00151 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDLIM1O00151 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDLIM1O00151 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDLIM1O00151 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.11■□□□□ 0.65
PDLIM1O00151 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDLIM1O00151 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDLIM1O00151 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PDLIM1O00151 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.11■□□□□ 0.65
PDLIM1O00151 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDLIM1O00151 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDLIM1O00151 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDLIM1O00151 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.11■□□□□ 0.65
PDLIM1O00151 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDLIM1O00151 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDLIM1O00151 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
PDLIM1O00151 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDLIM1O00151 BX005040.4-201ENST00000637145 1518 ntBASIC19.1■□□□□ 0.65
PDLIM1O00151 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDLIM1O00151 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PDLIM1O00151 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.1■□□□□ 0.65
PDLIM1O00151 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDLIM1O00151 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDLIM1O00151 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDLIM1O00151 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.1■□□□□ 0.65
PDLIM1O00151 MIR935-201ENST00000401179 91 ntBASIC19.1■□□□□ 0.65
PDLIM1O00151 AC026271.2-201ENST00000428091 497 ntBASIC19.1■□□□□ 0.65
PDLIM1O00151 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.1■□□□□ 0.65
PDLIM1O00151 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.1■□□□□ 0.65
PDLIM1O00151 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
PDLIM1O00151 AC005332.8-201ENST00000622750 2735 ntBASIC19.1■□□□□ 0.65
PDLIM1O00151 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDLIM1O00151 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms