Protein–RNA interactions for Protein: B2RD01

CENPBD1, CENPB DNA-binding domain-containing protein 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPBD1B2RD01 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.31■□□□□ 0.52
CENPBD1B2RD01 UBE2DNL-204ENST00000602536 740 ntBASIC18.31■□□□□ 0.52
CENPBD1B2RD01 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CENPBD1B2RD01 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
CENPBD1B2RD01 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CENPBD1B2RD01 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CENPBD1B2RD01 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CENPBD1B2RD01 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.31■□□□□ 0.52
CENPBD1B2RD01 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CENPBD1B2RD01 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CENPBD1B2RD01 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.31■□□□□ 0.52
CENPBD1B2RD01 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CENPBD1B2RD01 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CENPBD1B2RD01 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
CENPBD1B2RD01 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CENPBD1B2RD01 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CENPBD1B2RD01 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CENPBD1B2RD01 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CENPBD1B2RD01 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.3■□□□□ 0.52
CENPBD1B2RD01 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
CENPBD1B2RD01 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CENPBD1B2RD01 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.3■□□□□ 0.52
CENPBD1B2RD01 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CENPBD1B2RD01 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.3■□□□□ 0.52
CENPBD1B2RD01 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.3■□□□□ 0.52
CENPBD1B2RD01 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.3■□□□□ 0.52
CENPBD1B2RD01 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.3■□□□□ 0.52
CENPBD1B2RD01 MIR5787-201ENST00000611784 55 ntBASIC18.3■□□□□ 0.52
CENPBD1B2RD01 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CENPBD1B2RD01 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CENPBD1B2RD01 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CENPBD1B2RD01 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.3■□□□□ 0.52
CENPBD1B2RD01 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CENPBD1B2RD01 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CENPBD1B2RD01 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CENPBD1B2RD01 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CENPBD1B2RD01 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CENPBD1B2RD01 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CENPBD1B2RD01 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.29■□□□□ 0.52
CENPBD1B2RD01 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.29■□□□□ 0.52
CENPBD1B2RD01 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CENPBD1B2RD01 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CENPBD1B2RD01 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.29■□□□□ 0.52
CENPBD1B2RD01 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CENPBD1B2RD01 AC091799.1-201ENST00000422823 811 ntBASIC18.29■□□□□ 0.52
CENPBD1B2RD01 KRT18P5-201ENST00000436075 1291 ntBASIC18.29■□□□□ 0.52
CENPBD1B2RD01 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.29■□□□□ 0.52
CENPBD1B2RD01 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CENPBD1B2RD01 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CENPBD1B2RD01 AC005082.1-201ENST00000413042 2259 ntBASIC18.29■□□□□ 0.52
CENPBD1B2RD01 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CENPBD1B2RD01 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.29■□□□□ 0.52
CENPBD1B2RD01 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CENPBD1B2RD01 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.29■□□□□ 0.52
CENPBD1B2RD01 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CENPBD1B2RD01 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CENPBD1B2RD01 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CENPBD1B2RD01 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CENPBD1B2RD01 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CENPBD1B2RD01 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CENPBD1B2RD01 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CENPBD1B2RD01 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.28■□□□□ 0.52
CENPBD1B2RD01 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.28■□□□□ 0.52
CENPBD1B2RD01 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CENPBD1B2RD01 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CENPBD1B2RD01 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.28■□□□□ 0.52
CENPBD1B2RD01 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CENPBD1B2RD01 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.28■□□□□ 0.52
CENPBD1B2RD01 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.28■□□□□ 0.52
CENPBD1B2RD01 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CENPBD1B2RD01 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.28■□□□□ 0.52
CENPBD1B2RD01 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.28■□□□□ 0.52
CENPBD1B2RD01 AC073314.1-201ENST00000568729 2216 ntBASIC18.28■□□□□ 0.52
CENPBD1B2RD01 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CENPBD1B2RD01 AC098818.2-201ENST00000564925 2320 ntBASIC18.28■□□□□ 0.52
CENPBD1B2RD01 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CENPBD1B2RD01 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.28■□□□□ 0.52
CENPBD1B2RD01 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CENPBD1B2RD01 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CENPBD1B2RD01 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CENPBD1B2RD01 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CENPBD1B2RD01 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CENPBD1B2RD01 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CENPBD1B2RD01 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CENPBD1B2RD01 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CENPBD1B2RD01 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CENPBD1B2RD01 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CENPBD1B2RD01 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.27■□□□□ 0.52
CENPBD1B2RD01 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CENPBD1B2RD01 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CENPBD1B2RD01 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.27■□□□□ 0.52
CENPBD1B2RD01 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CENPBD1B2RD01 AC020907.5-201ENST00000624372 1936 ntBASIC18.27■□□□□ 0.51
CENPBD1B2RD01 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.27■□□□□ 0.51
CENPBD1B2RD01 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CENPBD1B2RD01 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
CENPBD1B2RD01 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.51
CENPBD1B2RD01 AFG3L1P-217ENST00000557444 2447 ntBASIC18.27■□□□□ 0.51
CENPBD1B2RD01 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.26■□□□□ 0.51
CENPBD1B2RD01 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms