Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC66A2RUB6 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.74■■□□□ 1.07
CCDC66A2RUB6 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC66A2RUB6 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CCDC66A2RUB6 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.74■■□□□ 1.07
CCDC66A2RUB6 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC66A2RUB6 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC66A2RUB6 AC027702.1-201ENST00000563810 1770 ntBASIC21.74■■□□□ 1.07
CCDC66A2RUB6 AC020916.1-201ENST00000587762 1774 ntBASIC21.74■■□□□ 1.07
CCDC66A2RUB6 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC21.73■■□□□ 1.07
CCDC66A2RUB6 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC66A2RUB6 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC66A2RUB6 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CCDC66A2RUB6 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CCDC66A2RUB6 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
CCDC66A2RUB6 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC66A2RUB6 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC66A2RUB6 TPRG1LP1-201ENST00000598702 760 ntBASIC21.73■■□□□ 1.07
CCDC66A2RUB6 AL354811.1-201ENST00000610286 706 ntBASIC21.73■■□□□ 1.07
CCDC66A2RUB6 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC66A2RUB6 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
CCDC66A2RUB6 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.73■■□□□ 1.07
CCDC66A2RUB6 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC21.73■■□□□ 1.07
CCDC66A2RUB6 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
CCDC66A2RUB6 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC66A2RUB6 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC66A2RUB6 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CCDC66A2RUB6 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC66A2RUB6 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC66A2RUB6 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC66A2RUB6 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC66A2RUB6 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.72■■□□□ 1.07
CCDC66A2RUB6 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC66A2RUB6 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC66A2RUB6 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC66A2RUB6 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
CCDC66A2RUB6 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC66A2RUB6 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.72■■□□□ 1.07
CCDC66A2RUB6 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.72■■□□□ 1.07
CCDC66A2RUB6 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC66A2RUB6 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC21.72■■□□□ 1.07
CCDC66A2RUB6 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC66A2RUB6 AC061975.6-201ENST00000579045 1553 ntBASIC21.72■■□□□ 1.07
CCDC66A2RUB6 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC66A2RUB6 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC66A2RUB6 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC21.72■■□□□ 1.07
CCDC66A2RUB6 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC66A2RUB6 AC090340.1-201ENST00000620778 4980 ntBASIC21.72■■□□□ 1.07
CCDC66A2RUB6 AC011484.1-201ENST00000377652 1995 ntBASIC21.72■■□□□ 1.07
CCDC66A2RUB6 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CCDC66A2RUB6 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC66A2RUB6 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC21.72■■□□□ 1.07
CCDC66A2RUB6 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC66A2RUB6 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC66A2RUB6 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC21.71■■□□□ 1.07
CCDC66A2RUB6 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC66A2RUB6 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC66A2RUB6 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC66A2RUB6 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CCDC66A2RUB6 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC66A2RUB6 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC66A2RUB6 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC66A2RUB6 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CCDC66A2RUB6 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC66A2RUB6 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC66A2RUB6 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.71■■□□□ 1.07
CCDC66A2RUB6 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC66A2RUB6 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
CCDC66A2RUB6 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
CCDC66A2RUB6 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC21.71■■□□□ 1.07
CCDC66A2RUB6 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC21.71■■□□□ 1.07
CCDC66A2RUB6 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC66A2RUB6 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CCDC66A2RUB6 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.71■■□□□ 1.07
CCDC66A2RUB6 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC66A2RUB6 AC020907.5-201ENST00000624372 1936 ntBASIC21.7■■□□□ 1.07
CCDC66A2RUB6 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
CCDC66A2RUB6 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC66A2RUB6 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
CCDC66A2RUB6 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC66A2RUB6 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC66A2RUB6 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC66A2RUB6 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC66A2RUB6 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC66A2RUB6 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC66A2RUB6 NEFHP1-201ENST00000412845 2629 ntBASIC21.7■■□□□ 1.06
CCDC66A2RUB6 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.7■■□□□ 1.06
CCDC66A2RUB6 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC66A2RUB6 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC66A2RUB6 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC66A2RUB6 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC66A2RUB6 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC66A2RUB6 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CCDC66A2RUB6 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CCDC66A2RUB6 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC66A2RUB6 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC66A2RUB6 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.69■■□□□ 1.06
CCDC66A2RUB6 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC66A2RUB6 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC66A2RUB6 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms