Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.3■□□□□ 0.84
TCRBV9S1A1TA0A576 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TCRBV9S1A1TA0A576 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
TCRBV9S1A1TA0A576 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TCRBV9S1A1TA0A576 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.3■□□□□ 0.84
TCRBV9S1A1TA0A576 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
TCRBV9S1A1TA0A576 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TCRBV9S1A1TA0A576 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TCRBV9S1A1TA0A576 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TCRBV9S1A1TA0A576 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.3■□□□□ 0.84
TCRBV9S1A1TA0A576 CDV3P1-201ENST00000471403 739 ntBASIC20.3■□□□□ 0.84
TCRBV9S1A1TA0A576 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.3■□□□□ 0.84
TCRBV9S1A1TA0A576 KRT18P61-201ENST00000585825 1298 ntBASIC20.3■□□□□ 0.84
TCRBV9S1A1TA0A576 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
TCRBV9S1A1TA0A576 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.3■□□□□ 0.84
TCRBV9S1A1TA0A576 RNF165-205ENST00000588679 2904 ntBASIC20.3■□□□□ 0.84
TCRBV9S1A1TA0A576 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TCRBV9S1A1TA0A576 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.3■□□□□ 0.84
TCRBV9S1A1TA0A576 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TCRBV9S1A1TA0A576 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TCRBV9S1A1TA0A576 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.29■□□□□ 0.84
TCRBV9S1A1TA0A576 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TCRBV9S1A1TA0A576 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.29■□□□□ 0.84
TCRBV9S1A1TA0A576 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
TCRBV9S1A1TA0A576 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.29■□□□□ 0.84
TCRBV9S1A1TA0A576 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.29■□□□□ 0.84
TCRBV9S1A1TA0A576 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TCRBV9S1A1TA0A576 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TCRBV9S1A1TA0A576 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.29■□□□□ 0.84
TCRBV9S1A1TA0A576 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.29■□□□□ 0.84
TCRBV9S1A1TA0A576 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.29■□□□□ 0.84
TCRBV9S1A1TA0A576 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.29■□□□□ 0.84
TCRBV9S1A1TA0A576 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.29■□□□□ 0.84
TCRBV9S1A1TA0A576 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TCRBV9S1A1TA0A576 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TCRBV9S1A1TA0A576 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.29■□□□□ 0.84
TCRBV9S1A1TA0A576 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.29■□□□□ 0.84
TCRBV9S1A1TA0A576 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TCRBV9S1A1TA0A576 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TCRBV9S1A1TA0A576 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV9S1A1TA0A576 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV9S1A1TA0A576 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV9S1A1TA0A576 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV9S1A1TA0A576 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
TCRBV9S1A1TA0A576 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV9S1A1TA0A576 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV9S1A1TA0A576 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV9S1A1TA0A576 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV9S1A1TA0A576 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.28■□□□□ 0.84
TCRBV9S1A1TA0A576 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.28■□□□□ 0.84
TCRBV9S1A1TA0A576 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
TCRBV9S1A1TA0A576 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
TCRBV9S1A1TA0A576 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV9S1A1TA0A576 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV9S1A1TA0A576 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV9S1A1TA0A576 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV9S1A1TA0A576 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.28■□□□□ 0.84
TCRBV9S1A1TA0A576 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV9S1A1TA0A576 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV9S1A1TA0A576 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV9S1A1TA0A576 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.28■□□□□ 0.84
TCRBV9S1A1TA0A576 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV9S1A1TA0A576 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TCRBV9S1A1TA0A576 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TCRBV9S1A1TA0A576 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TCRBV9S1A1TA0A576 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.27■□□□□ 0.84
TCRBV9S1A1TA0A576 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TCRBV9S1A1TA0A576 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TCRBV9S1A1TA0A576 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TCRBV9S1A1TA0A576 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
TCRBV9S1A1TA0A576 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TCRBV9S1A1TA0A576 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TCRBV9S1A1TA0A576 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TCRBV9S1A1TA0A576 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TCRBV9S1A1TA0A576 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.27■□□□□ 0.84
TCRBV9S1A1TA0A576 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TCRBV9S1A1TA0A576 UBE2DNL-204ENST00000602536 740 ntBASIC20.27■□□□□ 0.84
TCRBV9S1A1TA0A576 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
TCRBV9S1A1TA0A576 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TCRBV9S1A1TA0A576 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.27■□□□□ 0.84
TCRBV9S1A1TA0A576 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.27■□□□□ 0.84
TCRBV9S1A1TA0A576 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TCRBV9S1A1TA0A576 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
TCRBV9S1A1TA0A576 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
TCRBV9S1A1TA0A576 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TCRBV9S1A1TA0A576 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TCRBV9S1A1TA0A576 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.27■□□□□ 0.83
TCRBV9S1A1TA0A576 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TCRBV9S1A1TA0A576 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TCRBV9S1A1TA0A576 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.26■□□□□ 0.83
TCRBV9S1A1TA0A576 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.26■□□□□ 0.83
TCRBV9S1A1TA0A576 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TCRBV9S1A1TA0A576 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TCRBV9S1A1TA0A576 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TCRBV9S1A1TA0A576 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TCRBV9S1A1TA0A576 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TCRBV9S1A1TA0A576 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TCRBV9S1A1TA0A576 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TCRBV9S1A1TA0A576 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TCRBV9S1A1TA0A576 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms