Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.73■□□□□ 0.43
TRDV1A0A1B0GX56 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.73■□□□□ 0.43
TRDV1A0A1B0GX56 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
TRDV1A0A1B0GX56 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.73■□□□□ 0.43
TRDV1A0A1B0GX56 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRDV1A0A1B0GX56 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
TRDV1A0A1B0GX56 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRDV1A0A1B0GX56 IGHV3-19-201ENST00000521488 291 ntBASIC17.73■□□□□ 0.43
TRDV1A0A1B0GX56 AC008175.2-201ENST00000612840 297 ntBASIC17.73■□□□□ 0.43
TRDV1A0A1B0GX56 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRDV1A0A1B0GX56 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TRDV1A0A1B0GX56 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRDV1A0A1B0GX56 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TRDV1A0A1B0GX56 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRDV1A0A1B0GX56 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRDV1A0A1B0GX56 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.73■□□□□ 0.43
TRDV1A0A1B0GX56 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRDV1A0A1B0GX56 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TRDV1A0A1B0GX56 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.73■□□□□ 0.43
TRDV1A0A1B0GX56 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.73■□□□□ 0.43
TRDV1A0A1B0GX56 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRDV1A0A1B0GX56 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRDV1A0A1B0GX56 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.72■□□□□ 0.43
TRDV1A0A1B0GX56 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.72■□□□□ 0.43
TRDV1A0A1B0GX56 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRDV1A0A1B0GX56 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRDV1A0A1B0GX56 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRDV1A0A1B0GX56 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRDV1A0A1B0GX56 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRDV1A0A1B0GX56 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
TRDV1A0A1B0GX56 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRDV1A0A1B0GX56 AC116050.2-201ENST00000612102 1779 ntBASIC17.72■□□□□ 0.43
TRDV1A0A1B0GX56 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRDV1A0A1B0GX56 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRDV1A0A1B0GX56 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRDV1A0A1B0GX56 NEFHP1-201ENST00000412845 2629 ntBASIC17.72■□□□□ 0.43
TRDV1A0A1B0GX56 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.72■□□□□ 0.43
TRDV1A0A1B0GX56 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRDV1A0A1B0GX56 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRDV1A0A1B0GX56 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRDV1A0A1B0GX56 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.72■□□□□ 0.43
TRDV1A0A1B0GX56 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRDV1A0A1B0GX56 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRDV1A0A1B0GX56 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.72■□□□□ 0.43
TRDV1A0A1B0GX56 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.72■□□□□ 0.43
TRDV1A0A1B0GX56 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRDV1A0A1B0GX56 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.71■□□□□ 0.43
TRDV1A0A1B0GX56 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.71■□□□□ 0.43
TRDV1A0A1B0GX56 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.71■□□□□ 0.43
TRDV1A0A1B0GX56 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRDV1A0A1B0GX56 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.71■□□□□ 0.43
TRDV1A0A1B0GX56 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRDV1A0A1B0GX56 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
TRDV1A0A1B0GX56 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRDV1A0A1B0GX56 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.71■□□□□ 0.43
TRDV1A0A1B0GX56 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.71■□□□□ 0.43
TRDV1A0A1B0GX56 AC245052.3-201ENST00000450182 901 ntBASIC17.71■□□□□ 0.43
TRDV1A0A1B0GX56 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC17.71■□□□□ 0.43
TRDV1A0A1B0GX56 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRDV1A0A1B0GX56 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TRDV1A0A1B0GX56 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRDV1A0A1B0GX56 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.71■□□□□ 0.43
TRDV1A0A1B0GX56 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
TRDV1A0A1B0GX56 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.71■□□□□ 0.42
TRDV1A0A1B0GX56 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.71■□□□□ 0.42
TRDV1A0A1B0GX56 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.71■□□□□ 0.42
TRDV1A0A1B0GX56 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRDV1A0A1B0GX56 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.7■□□□□ 0.42
TRDV1A0A1B0GX56 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRDV1A0A1B0GX56 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
TRDV1A0A1B0GX56 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.7■□□□□ 0.42
TRDV1A0A1B0GX56 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
TRDV1A0A1B0GX56 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.7■□□□□ 0.42
TRDV1A0A1B0GX56 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRDV1A0A1B0GX56 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.7■□□□□ 0.42
TRDV1A0A1B0GX56 AC105233.4-201ENST00000642045 216 ntBASIC17.7■□□□□ 0.42
TRDV1A0A1B0GX56 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRDV1A0A1B0GX56 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRDV1A0A1B0GX56 KRT8P36-201ENST00000489121 1440 ntBASIC17.7■□□□□ 0.42
TRDV1A0A1B0GX56 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.7■□□□□ 0.42
TRDV1A0A1B0GX56 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRDV1A0A1B0GX56 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.7■□□□□ 0.42
TRDV1A0A1B0GX56 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRDV1A0A1B0GX56 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRDV1A0A1B0GX56 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRDV1A0A1B0GX56 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.69■□□□□ 0.42
TRDV1A0A1B0GX56 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TRDV1A0A1B0GX56 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRDV1A0A1B0GX56 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRDV1A0A1B0GX56 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRDV1A0A1B0GX56 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRDV1A0A1B0GX56 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRDV1A0A1B0GX56 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRDV1A0A1B0GX56 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRDV1A0A1B0GX56 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRDV1A0A1B0GX56 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRDV1A0A1B0GX56 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TRDV1A0A1B0GX56 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRDV1A0A1B0GX56 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRDV1A0A1B0GX56 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms