Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
SMIM28A0A1B0GU29 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.7■■□□□ 1.06
SMIM28A0A1B0GU29 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.7■■□□□ 1.06
SMIM28A0A1B0GU29 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.7■■□□□ 1.06
SMIM28A0A1B0GU29 AP006294.2-201ENST00000641667 209 ntBASIC21.7■■□□□ 1.06
SMIM28A0A1B0GU29 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SMIM28A0A1B0GU29 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
SMIM28A0A1B0GU29 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.69■■□□□ 1.06
SMIM28A0A1B0GU29 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.69■■□□□ 1.06
SMIM28A0A1B0GU29 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
SMIM28A0A1B0GU29 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.69■■□□□ 1.06
SMIM28A0A1B0GU29 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMIM28A0A1B0GU29 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMIM28A0A1B0GU29 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.69■■□□□ 1.06
SMIM28A0A1B0GU29 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.69■■□□□ 1.06
SMIM28A0A1B0GU29 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMIM28A0A1B0GU29 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.69■■□□□ 1.06
SMIM28A0A1B0GU29 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.69■■□□□ 1.06
SMIM28A0A1B0GU29 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.69■■□□□ 1.06
SMIM28A0A1B0GU29 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.69■■□□□ 1.06
SMIM28A0A1B0GU29 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.69■■□□□ 1.06
SMIM28A0A1B0GU29 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SMIM28A0A1B0GU29 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.69■■□□□ 1.06
SMIM28A0A1B0GU29 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.69■■□□□ 1.06
SMIM28A0A1B0GU29 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.69■■□□□ 1.06
SMIM28A0A1B0GU29 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
SMIM28A0A1B0GU29 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMIM28A0A1B0GU29 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMIM28A0A1B0GU29 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.69■■□□□ 1.06
SMIM28A0A1B0GU29 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMIM28A0A1B0GU29 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMIM28A0A1B0GU29 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.68■■□□□ 1.06
SMIM28A0A1B0GU29 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMIM28A0A1B0GU29 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMIM28A0A1B0GU29 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SMIM28A0A1B0GU29 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
SMIM28A0A1B0GU29 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SMIM28A0A1B0GU29 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
SMIM28A0A1B0GU29 UBE2SP1-201ENST00000450587 669 ntBASIC21.68■■□□□ 1.06
SMIM28A0A1B0GU29 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
SMIM28A0A1B0GU29 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.68■■□□□ 1.06
SMIM28A0A1B0GU29 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.68■■□□□ 1.06
SMIM28A0A1B0GU29 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
SMIM28A0A1B0GU29 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SMIM28A0A1B0GU29 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.68■■□□□ 1.06
SMIM28A0A1B0GU29 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMIM28A0A1B0GU29 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMIM28A0A1B0GU29 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
SMIM28A0A1B0GU29 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMIM28A0A1B0GU29 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMIM28A0A1B0GU29 AL137060.1-201ENST00000618151 2648 ntBASIC21.68■■□□□ 1.06
SMIM28A0A1B0GU29 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMIM28A0A1B0GU29 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMIM28A0A1B0GU29 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMIM28A0A1B0GU29 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMIM28A0A1B0GU29 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMIM28A0A1B0GU29 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.67■■□□□ 1.06
SMIM28A0A1B0GU29 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMIM28A0A1B0GU29 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
SMIM28A0A1B0GU29 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.67■■□□□ 1.06
SMIM28A0A1B0GU29 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMIM28A0A1B0GU29 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMIM28A0A1B0GU29 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SMIM28A0A1B0GU29 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.67■■□□□ 1.06
SMIM28A0A1B0GU29 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMIM28A0A1B0GU29 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.67■■□□□ 1.06
SMIM28A0A1B0GU29 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.67■■□□□ 1.06
SMIM28A0A1B0GU29 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.67■■□□□ 1.06
SMIM28A0A1B0GU29 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SMIM28A0A1B0GU29 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.67■■□□□ 1.06
SMIM28A0A1B0GU29 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMIM28A0A1B0GU29 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.67■■□□□ 1.06
SMIM28A0A1B0GU29 FAM197Y4-202ENST00000622692 608 ntBASIC21.67■■□□□ 1.06
SMIM28A0A1B0GU29 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMIM28A0A1B0GU29 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.67■■□□□ 1.06
SMIM28A0A1B0GU29 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SMIM28A0A1B0GU29 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.67■■□□□ 1.06
SMIM28A0A1B0GU29 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMIM28A0A1B0GU29 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMIM28A0A1B0GU29 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.66■■□□□ 1.06
SMIM28A0A1B0GU29 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.66■■□□□ 1.06
SMIM28A0A1B0GU29 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMIM28A0A1B0GU29 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMIM28A0A1B0GU29 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
SMIM28A0A1B0GU29 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
SMIM28A0A1B0GU29 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
SMIM28A0A1B0GU29 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMIM28A0A1B0GU29 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMIM28A0A1B0GU29 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SMIM28A0A1B0GU29 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.66■■□□□ 1.06
SMIM28A0A1B0GU29 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.66■■□□□ 1.06
SMIM28A0A1B0GU29 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.66■■□□□ 1.06
SMIM28A0A1B0GU29 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.66■■□□□ 1.06
SMIM28A0A1B0GU29 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.66■■□□□ 1.06
SMIM28A0A1B0GU29 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.66■■□□□ 1.06
SMIM28A0A1B0GU29 AL023875.1-201ENST00000640777 796 ntBASIC21.66■■□□□ 1.06
SMIM28A0A1B0GU29 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMIM28A0A1B0GU29 AC124283.5-201ENST00000624661 1809 ntBASIC21.66■■□□□ 1.06
SMIM28A0A1B0GU29 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SMIM28A0A1B0GU29 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms