Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV13-1A0A0B4J241 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV13-1A0A0B4J241 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAV13-1A0A0B4J241 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAV13-1A0A0B4J241 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAV13-1A0A0B4J241 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAV13-1A0A0B4J241 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC14.04□□□□□ -0.16
TRAV13-1A0A0B4J241 AC027682.1-201ENST00000562846 899 ntBASIC14.04□□□□□ -0.16
TRAV13-1A0A0B4J241 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC14.04□□□□□ -0.16
TRAV13-1A0A0B4J241 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAV13-1A0A0B4J241 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV13-1A0A0B4J241 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
TRAV13-1A0A0B4J241 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAV13-1A0A0B4J241 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAV13-1A0A0B4J241 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV13-1A0A0B4J241 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAV13-1A0A0B4J241 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV13-1A0A0B4J241 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TRAV13-1A0A0B4J241 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TRAV13-1A0A0B4J241 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
TRAV13-1A0A0B4J241 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TRAV13-1A0A0B4J241 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV13-1A0A0B4J241 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV13-1A0A0B4J241 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV13-1A0A0B4J241 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV13-1A0A0B4J241 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV13-1A0A0B4J241 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TRAV13-1A0A0B4J241 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV13-1A0A0B4J241 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV13-1A0A0B4J241 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV13-1A0A0B4J241 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV13-1A0A0B4J241 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAV13-1A0A0B4J241 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV13-1A0A0B4J241 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV13-1A0A0B4J241 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC14.03□□□□□ -0.16
TRAV13-1A0A0B4J241 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC14.03□□□□□ -0.16
TRAV13-1A0A0B4J241 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC14.03□□□□□ -0.16
TRAV13-1A0A0B4J241 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TRAV13-1A0A0B4J241 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC14.03□□□□□ -0.16
TRAV13-1A0A0B4J241 AC008175.2-201ENST00000612840 297 ntBASIC14.03□□□□□ -0.16
TRAV13-1A0A0B4J241 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV13-1A0A0B4J241 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAV13-1A0A0B4J241 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV13-1A0A0B4J241 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
TRAV13-1A0A0B4J241 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV13-1A0A0B4J241 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV13-1A0A0B4J241 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV13-1A0A0B4J241 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAV13-1A0A0B4J241 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV13-1A0A0B4J241 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV13-1A0A0B4J241 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV13-1A0A0B4J241 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV13-1A0A0B4J241 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV13-1A0A0B4J241 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV13-1A0A0B4J241 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV13-1A0A0B4J241 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV13-1A0A0B4J241 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV13-1A0A0B4J241 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC14.02□□□□□ -0.16
TRAV13-1A0A0B4J241 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV13-1A0A0B4J241 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV13-1A0A0B4J241 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV13-1A0A0B4J241 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV13-1A0A0B4J241 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC14.02□□□□□ -0.16
TRAV13-1A0A0B4J241 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
TRAV13-1A0A0B4J241 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV13-1A0A0B4J241 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV13-1A0A0B4J241 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
TRAV13-1A0A0B4J241 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV13-1A0A0B4J241 MFF-207ENST00000409565 1548 ntTSL 2 BASIC14.02□□□□□ -0.16
TRAV13-1A0A0B4J241 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV13-1A0A0B4J241 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAV13-1A0A0B4J241 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV13-1A0A0B4J241 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
TRAV13-1A0A0B4J241 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV13-1A0A0B4J241 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAV13-1A0A0B4J241 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAV13-1A0A0B4J241 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC14.02□□□□□ -0.17
TRAV13-1A0A0B4J241 EEF1DP3-203ENST00000566025 782 ntBASIC14.02□□□□□ -0.17
TRAV13-1A0A0B4J241 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAV13-1A0A0B4J241 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC14.02□□□□□ -0.17
TRAV13-1A0A0B4J241 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV13-1A0A0B4J241 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV13-1A0A0B4J241 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV13-1A0A0B4J241 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV13-1A0A0B4J241 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV13-1A0A0B4J241 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAV13-1A0A0B4J241 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAV13-1A0A0B4J241 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV13-1A0A0B4J241 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV13-1A0A0B4J241 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
TRAV13-1A0A0B4J241 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV13-1A0A0B4J241 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
TRAV13-1A0A0B4J241 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV13-1A0A0B4J241 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV13-1A0A0B4J241 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TRAV13-1A0A0B4J241 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV13-1A0A0B4J241 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TRAV13-1A0A0B4J241 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV13-1A0A0B4J241 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
TRAV13-1A0A0B4J241 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms