Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAV19A0A0A6YYK7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAV19A0A0A6YYK7 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.95■□□□□ 0.94
TRAV19A0A0A6YYK7 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.94■□□□□ 0.94
TRAV19A0A0A6YYK7 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAV19A0A0A6YYK7 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAV19A0A0A6YYK7 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
TRAV19A0A0A6YYK7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
TRAV19A0A0A6YYK7 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
TRAV19A0A0A6YYK7 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAV19A0A0A6YYK7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.94■□□□□ 0.94
TRAV19A0A0A6YYK7 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.94■□□□□ 0.94
TRAV19A0A0A6YYK7 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.94■□□□□ 0.94
TRAV19A0A0A6YYK7 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.94■□□□□ 0.94
TRAV19A0A0A6YYK7 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.94■□□□□ 0.94
TRAV19A0A0A6YYK7 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAV19A0A0A6YYK7 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAV19A0A0A6YYK7 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAV19A0A0A6YYK7 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.93■□□□□ 0.94
TRAV19A0A0A6YYK7 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAV19A0A0A6YYK7 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.93■□□□□ 0.94
TRAV19A0A0A6YYK7 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRAV19A0A0A6YYK7 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.93■□□□□ 0.94
TRAV19A0A0A6YYK7 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.93■□□□□ 0.94
TRAV19A0A0A6YYK7 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRAV19A0A0A6YYK7 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAV19A0A0A6YYK7 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRAV19A0A0A6YYK7 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAV19A0A0A6YYK7 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAV19A0A0A6YYK7 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRAV19A0A0A6YYK7 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.92■□□□□ 0.94
TRAV19A0A0A6YYK7 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAV19A0A0A6YYK7 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAV19A0A0A6YYK7 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAV19A0A0A6YYK7 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TRAV19A0A0A6YYK7 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
TRAV19A0A0A6YYK7 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.92■□□□□ 0.94
TRAV19A0A0A6YYK7 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.92■□□□□ 0.94
TRAV19A0A0A6YYK7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.92■□□□□ 0.94
TRAV19A0A0A6YYK7 MIR4497-201ENST00000583208 89 ntBASIC20.92■□□□□ 0.94
TRAV19A0A0A6YYK7 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TRAV19A0A0A6YYK7 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAV19A0A0A6YYK7 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAV19A0A0A6YYK7 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAV19A0A0A6YYK7 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRAV19A0A0A6YYK7 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.92■□□□□ 0.94
TRAV19A0A0A6YYK7 PLK5-205ENST00000642079 1969 ntBASIC20.92■□□□□ 0.94
TRAV19A0A0A6YYK7 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAV19A0A0A6YYK7 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.92■□□□□ 0.94
TRAV19A0A0A6YYK7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAV19A0A0A6YYK7 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.92■□□□□ 0.94
TRAV19A0A0A6YYK7 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.92■□□□□ 0.94
TRAV19A0A0A6YYK7 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAV19A0A0A6YYK7 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.92■□□□□ 0.94
TRAV19A0A0A6YYK7 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
TRAV19A0A0A6YYK7 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRAV19A0A0A6YYK7 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRAV19A0A0A6YYK7 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.91■□□□□ 0.94
TRAV19A0A0A6YYK7 AC012618.2-201ENST00000428058 849 ntBASIC20.91■□□□□ 0.94
TRAV19A0A0A6YYK7 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRAV19A0A0A6YYK7 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.91■□□□□ 0.94
TRAV19A0A0A6YYK7 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
TRAV19A0A0A6YYK7 AL121829.2-201ENST00000620908 328 ntBASIC20.91■□□□□ 0.94
TRAV19A0A0A6YYK7 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.91■□□□□ 0.94
TRAV19A0A0A6YYK7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRAV19A0A0A6YYK7 PKD1P6-201ENST00000343738 4769 ntBASIC20.9■□□□□ 0.94
TRAV19A0A0A6YYK7 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAV19A0A0A6YYK7 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAV19A0A0A6YYK7 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAV19A0A0A6YYK7 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.9■□□□□ 0.94
TRAV19A0A0A6YYK7 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAV19A0A0A6YYK7 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
TRAV19A0A0A6YYK7 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRAV19A0A0A6YYK7 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TRAV19A0A0A6YYK7 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.9■□□□□ 0.94
TRAV19A0A0A6YYK7 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRAV19A0A0A6YYK7 HLA-G-202ENST00000376815 851 ntBASIC20.9■□□□□ 0.94
TRAV19A0A0A6YYK7 HLA-G-203ENST00000376818 1127 ntBASIC20.9■□□□□ 0.94
TRAV19A0A0A6YYK7 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
TRAV19A0A0A6YYK7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRAV19A0A0A6YYK7 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.9■□□□□ 0.94
TRAV19A0A0A6YYK7 SNORA78-201ENST00000459373 127 ntBASIC20.9■□□□□ 0.94
TRAV19A0A0A6YYK7 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.9■□□□□ 0.94
TRAV19A0A0A6YYK7 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.9■□□□□ 0.94
TRAV19A0A0A6YYK7 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.9■□□□□ 0.94
TRAV19A0A0A6YYK7 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.9■□□□□ 0.94
TRAV19A0A0A6YYK7 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TRAV19A0A0A6YYK7 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRAV19A0A0A6YYK7 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRAV19A0A0A6YYK7 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
TRAV19A0A0A6YYK7 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRAV19A0A0A6YYK7 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
TRAV19A0A0A6YYK7 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAV19A0A0A6YYK7 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAV19A0A0A6YYK7 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.89■□□□□ 0.93
TRAV19A0A0A6YYK7 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
TRAV19A0A0A6YYK7 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
TRAV19A0A0A6YYK7 AF106564.1-201ENST00000607058 2553 ntBASIC20.89■□□□□ 0.93
TRAV19A0A0A6YYK7 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAV19A0A0A6YYK7 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms