Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 SRGAP2-203ENST00000573034 6301 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
LMO3Q8TAP4 GSTO2-202ENST00000369707 6423 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
LMO3Q8TAP4 SOX6-211ENST00000528429 2656 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
LMO3Q8TAP4 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
LMO3Q8TAP4 MKL2-205ENST00000572567 2185 ntTSL 2 BASIC8.31□□□□□ -1.08
LMO3Q8TAP4 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
LMO3Q8TAP4 PRSS51-203ENST00000636217 2255 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
LMO3Q8TAP4 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
LMO3Q8TAP4 NF1P7-201ENST00000612076 1530 ntBASIC8.31□□□□□ -1.08
LMO3Q8TAP4 CNTN4-202ENST00000397461 5198 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
LMO3Q8TAP4 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
LMO3Q8TAP4 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
LMO3Q8TAP4 AC069213.1-202ENST00000417011 810 ntTSL 2 BASIC8.31□□□□□ -1.08
LMO3Q8TAP4 AL358942.1-201ENST00000418595 1178 ntBASIC8.31□□□□□ -1.08
LMO3Q8TAP4 AL590730.1-202ENST00000418875 321 ntTSL 2 BASIC8.31□□□□□ -1.08
LMO3Q8TAP4 RPL35P8-201ENST00000433284 337 ntBASIC8.31□□□□□ -1.08
LMO3Q8TAP4 LINC02474-202ENST00000441160 1148 ntTSL 5 BASIC8.31□□□□□ -1.08
LMO3Q8TAP4 RPL7L1P11-201ENST00000446092 721 ntBASIC8.31□□□□□ -1.08
LMO3Q8TAP4 FTH1P7-201ENST00000450676 552 ntBASIC8.31□□□□□ -1.08
LMO3Q8TAP4 KIF3AP1-201ENST00000454055 611 ntBASIC8.31□□□□□ -1.08
LMO3Q8TAP4 AC087385.2-201ENST00000477729 498 ntBASIC8.31□□□□□ -1.08
LMO3Q8TAP4 GGTA1P-204ENST00000488429 1104 ntBASIC8.31□□□□□ -1.08
LMO3Q8TAP4 FTH1P23-201ENST00000492727 550 ntBASIC8.31□□□□□ -1.08
LMO3Q8TAP4 SUMO2P17-201ENST00000504438 285 ntBASIC8.31□□□□□ -1.08
LMO3Q8TAP4 AC084026.2-201ENST00000521101 642 ntTSL 3 BASIC8.31□□□□□ -1.08
LMO3Q8TAP4 AC090568.2-203ENST00000521433 579 ntTSL 4 BASIC8.31□□□□□ -1.08
LMO3Q8TAP4 AC083841.1-201ENST00000523657 670 ntTSL 2 BASIC8.31□□□□□ -1.08
LMO3Q8TAP4 RASSF8-AS1-204ENST00000535436 1121 ntTSL 4 BASIC8.31□□□□□ -1.08
LMO3Q8TAP4 AP003721.2-201ENST00000536495 452 ntTSL 3 BASIC8.31□□□□□ -1.08
LMO3Q8TAP4 NPIPP1-203ENST00000547107 1071 ntBASIC8.31□□□□□ -1.08
LMO3Q8TAP4 AC023794.4-201ENST00000551732 754 ntTSL 5 BASIC8.31□□□□□ -1.08
LMO3Q8TAP4 SRMP2-201ENST00000553832 916 ntBASIC8.31□□□□□ -1.08
LMO3Q8TAP4 AL591767.1-201ENST00000557160 568 ntTSL 4 BASIC8.31□□□□□ -1.08
LMO3Q8TAP4 AL358334.3-201ENST00000557343 535 ntTSL 3 BASIC8.31□□□□□ -1.08
LMO3Q8TAP4 AC090699.1-201ENST00000586264 321 ntBASIC8.31□□□□□ -1.08
LMO3Q8TAP4 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC8.31□□□□□ -1.08
LMO3Q8TAP4 AL451085.1-201ENST00000604546 690 ntBASIC8.31□□□□□ -1.08
LMO3Q8TAP4 AL021807.1-201ENST00000607175 565 ntBASIC8.31□□□□□ -1.08
LMO3Q8TAP4 MILR1-202ENST00000612535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
LMO3Q8TAP4 MIR6872-201ENST00000612981 62 ntBASIC8.31□□□□□ -1.08
LMO3Q8TAP4 STK32A-209ENST00000626951 798 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
LMO3Q8TAP4 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
LMO3Q8TAP4 Z97832.2-201ENST00000605896 4261 ntBASIC8.31□□□□□ -1.08
LMO3Q8TAP4 BCLAF3-203ENST00000379687 6528 ntAPPRIS P2 TSL 5 BASIC8.31□□□□□ -1.08
LMO3Q8TAP4 AC098657.2-201ENST00000567886 1976 ntBASIC8.31□□□□□ -1.08
LMO3Q8TAP4 CD40LG-201ENST00000370628 1720 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
LMO3Q8TAP4 FCGR3A-201ENST00000367967 2086 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
LMO3Q8TAP4 FGL1-203ENST00000398054 1462 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
LMO3Q8TAP4 AC016251.1-201ENST00000624299 4198 ntBASIC8.31□□□□□ -1.08
LMO3Q8TAP4 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC8.31□□□□□ -1.08
LMO3Q8TAP4 TRIM66-201ENST00000299550 9753 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
LMO3Q8TAP4 ROBO2-201ENST00000332191 5437 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
LMO3Q8TAP4 GNPAT-201ENST00000366647 2643 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
LMO3Q8TAP4 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
LMO3Q8TAP4 CHCHD7-207ENST00000518801 1670 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
LMO3Q8TAP4 GTF2H2-201ENST00000274400 4336 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
LMO3Q8TAP4 TM4SF1-201ENST00000305366 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
LMO3Q8TAP4 LINC00299-201ENST00000430192 1760 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
LMO3Q8TAP4 PTBP2-203ENST00000426398 3027 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
LMO3Q8TAP4 AC126773.4-201ENST00000612545 3043 ntBASIC8.3□□□□□ -1.08
LMO3Q8TAP4 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC8.3□□□□□ -1.08
LMO3Q8TAP4 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
LMO3Q8TAP4 NUGGC-201ENST00000413272 3887 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
LMO3Q8TAP4 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
LMO3Q8TAP4 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
LMO3Q8TAP4 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC8.3□□□□□ -1.08
LMO3Q8TAP4 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
LMO3Q8TAP4 ORM1-201ENST00000259396 802 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
LMO3Q8TAP4 OR5E1P-201ENST00000305754 927 ntBASIC8.3□□□□□ -1.08
LMO3Q8TAP4 RPL12-201ENST00000361436 633 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
LMO3Q8TAP4 CBWD5-205ENST00000377395 1143 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
LMO3Q8TAP4 IGKV3-15-201ENST00000390252 442 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
LMO3Q8TAP4 PSG11-203ENST00000403486 1163 ntTSL 2 BASIC8.3□□□□□ -1.08
LMO3Q8TAP4 STAG3L1-201ENST00000404291 496 ntTSL 3 BASIC8.3□□□□□ -1.08
LMO3Q8TAP4 AL355375.1-201ENST00000405686 392 ntBASIC8.3□□□□□ -1.08
LMO3Q8TAP4 AKR1B15-201ENST00000423958 1035 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
LMO3Q8TAP4 AL390866.1-201ENST00000425137 469 ntTSL 5 BASIC8.3□□□□□ -1.08
LMO3Q8TAP4 HMGN2P24-201ENST00000433516 273 ntBASIC8.3□□□□□ -1.08
LMO3Q8TAP4 RPS13P2-201ENST00000437890 455 ntBASIC8.3□□□□□ -1.08
LMO3Q8TAP4 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC8.3□□□□□ -1.08
LMO3Q8TAP4 GNA14-AS1-201ENST00000439145 605 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
LMO3Q8TAP4 RPL4P2-201ENST00000447259 1282 ntBASIC8.3□□□□□ -1.08
LMO3Q8TAP4 ENTPD1-AS1-206ENST00000449197 523 ntTSL 2 BASIC8.3□□□□□ -1.08
LMO3Q8TAP4 LINC00992-201ENST00000504107 617 ntTSL 2 BASIC8.3□□□□□ -1.08
LMO3Q8TAP4 AC113352.1-201ENST00000513196 666 ntBASIC8.3□□□□□ -1.08
LMO3Q8TAP4 CARD8-214ENST00000520007 614 ntTSL 2 BASIC8.3□□□□□ -1.08
LMO3Q8TAP4 AC022796.1-202ENST00000531882 477 ntTSL 5 BASIC8.3□□□□□ -1.08
LMO3Q8TAP4 LINC01588-213ENST00000557142 492 ntTSL 3 BASIC8.3□□□□□ -1.08
LMO3Q8TAP4 RN7SL376P-201ENST00000578594 264 ntBASIC8.3□□□□□ -1.08
LMO3Q8TAP4 AC015908.3-201ENST00000579529 667 ntTSL 3 BASIC8.3□□□□□ -1.08
LMO3Q8TAP4 AC105243.1-202ENST00000583942 847 ntTSL 3 BASIC8.3□□□□□ -1.08
LMO3Q8TAP4 Metazoa_SRP.124-201ENST00000610352 345 ntBASIC8.3□□□□□ -1.08
LMO3Q8TAP4 AC133485.6-201ENST00000624045 688 ntBASIC8.3□□□□□ -1.08
LMO3Q8TAP4 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
LMO3Q8TAP4 EIF3F-208ENST00000533626 7540 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
LMO3Q8TAP4 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
LMO3Q8TAP4 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
LMO3Q8TAP4 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
LMO3Q8TAP4 NLRP3-203ENST00000366496 3996 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
LMO3Q8TAP4 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms