Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 MMADHC-202ENST00000422782 1462 ntTSL 5 BASIC8.34□□□□□ -1.07
CDK5RAP1Q96SZ6 PIWIL3-201ENST00000332271 3504 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
CDK5RAP1Q96SZ6 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CDK5RAP1Q96SZ6 AL357055.3-201ENST00000421157 2459 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CDK5RAP1Q96SZ6 PDE4D-208ENST00000502484 2478 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CDK5RAP1Q96SZ6 SND1-IT1-201ENST00000623342 2481 ntBASIC8.34□□□□□ -1.07
CDK5RAP1Q96SZ6 SPATA19-201ENST00000299140 861 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CDK5RAP1Q96SZ6 EEF1AKMT1-202ENST00000382758 1042 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CDK5RAP1Q96SZ6 AMELY-202ENST00000383036 621 ntTSL 5 BASIC8.34□□□□□ -1.07
CDK5RAP1Q96SZ6 ATP5J2-203ENST00000394186 305 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
CDK5RAP1Q96SZ6 AL008626.1-201ENST00000412357 775 ntTSL 2 BASIC8.34□□□□□ -1.07
CDK5RAP1Q96SZ6 AP001042.1-201ENST00000416842 487 ntTSL 3 BASIC8.34□□□□□ -1.07
CDK5RAP1Q96SZ6 AC079584.1-201ENST00000426716 464 ntTSL 3 BASIC8.34□□□□□ -1.07
CDK5RAP1Q96SZ6 AL031963.2-201ENST00000433761 398 ntTSL 2 BASIC8.34□□□□□ -1.07
CDK5RAP1Q96SZ6 RBM22P5-201ENST00000449536 1277 ntBASIC8.34□□□□□ -1.07
CDK5RAP1Q96SZ6 AC080129.1-201ENST00000457815 406 ntTSL 3 BASIC8.34□□□□□ -1.07
CDK5RAP1Q96SZ6 DLX5-202ENST00000486603 1074 ntTSL 2 BASIC8.34□□□□□ -1.07
CDK5RAP1Q96SZ6 NMNAT1P4-201ENST00000505598 840 ntBASIC8.34□□□□□ -1.07
CDK5RAP1Q96SZ6 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC8.34□□□□□ -1.07
CDK5RAP1Q96SZ6 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC8.34□□□□□ -1.07
CDK5RAP1Q96SZ6 AC132192.1-201ENST00000531111 597 ntTSL 3 BASIC8.34□□□□□ -1.07
CDK5RAP1Q96SZ6 FTH1-207ENST00000532601 742 ntTSL 3 BASIC8.34□□□□□ -1.07
CDK5RAP1Q96SZ6 AC139099.1-203ENST00000570366 607 ntTSL 3 BASIC8.34□□□□□ -1.07
CDK5RAP1Q96SZ6 RPL35AP25-201ENST00000584631 330 ntBASIC8.34□□□□□ -1.07
CDK5RAP1Q96SZ6 RPL23AP77-201ENST00000588044 463 ntBASIC8.34□□□□□ -1.07
CDK5RAP1Q96SZ6 RNVU1-19-201ENST00000613023 167 ntBASIC8.34□□□□□ -1.07
CDK5RAP1Q96SZ6 CRYAB-216ENST00000616970 977 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
CDK5RAP1Q96SZ6 NUDT13-208ENST00000617744 928 ntTSL 5 BASIC8.34□□□□□ -1.07
CDK5RAP1Q96SZ6 AL355480.4-201ENST00000626823 69 ntBASIC8.34□□□□□ -1.07
CDK5RAP1Q96SZ6 AC012560.1-201ENST00000634930 459 ntTSL 3 BASIC8.34□□□□□ -1.07
CDK5RAP1Q96SZ6 LINC01748-205ENST00000635616 2143 ntTSL 5 BASIC8.34□□□□□ -1.07
CDK5RAP1Q96SZ6 ZNF781-201ENST00000358582 3147 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CDK5RAP1Q96SZ6 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
CDK5RAP1Q96SZ6 AC120114.2-201ENST00000567795 2272 ntBASIC8.34□□□□□ -1.07
CDK5RAP1Q96SZ6 LY75-CD302-202ENST00000505052 5482 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.07
CDK5RAP1Q96SZ6 RNF14-203ENST00000394514 2905 ntTSL 2 BASIC8.34□□□□□ -1.07
CDK5RAP1Q96SZ6 RASSF5-209ENST00000636182 3427 ntTSL 5 BASIC8.34□□□□□ -1.07
CDK5RAP1Q96SZ6 TNPO3-202ENST00000471166 3019 ntTSL 5 BASIC8.34□□□□□ -1.07
CDK5RAP1Q96SZ6 FMO9P-202ENST00000488458 1535 ntBASIC8.34□□□□□ -1.08
CDK5RAP1Q96SZ6 ADCY10P1-203ENST00000567255 4569 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
CDK5RAP1Q96SZ6 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
CDK5RAP1Q96SZ6 ZNF493-201ENST00000339914 1665 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
CDK5RAP1Q96SZ6 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.08
CDK5RAP1Q96SZ6 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.08
CDK5RAP1Q96SZ6 TLR1-202ENST00000502213 2779 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 PICALM-201ENST00000356360 1958 ntTSL 5 BASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 AC012513.3-201ENST00000623250 2116 ntBASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 CTAGE15-201ENST00000420911 2587 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 RECQL-203ENST00000421138 2572 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 AL117378.2-201ENST00000622916 1337 ntBASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 UBR4-202ENST00000375224 3475 ntTSL 2 BASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 EPB41L5-202ENST00000331393 1777 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 PHF21A-201ENST00000323180 3675 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 KCNIP2-202ENST00000343195 663 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 PHACTR1-204ENST00000379348 795 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 PCNAP3-201ENST00000397222 778 ntBASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 PSG11-203ENST00000403486 1163 ntTSL 2 BASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 LINC01066-201ENST00000415283 399 ntTSL 3 BASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 AC107419.1-201ENST00000422048 1879 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 AL589990.1-201ENST00000432210 592 ntTSL 3 BASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 RN7SL12P-201ENST00000473849 290 ntBASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 AC109811.2-201ENST00000509609 452 ntBASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 LINC00499-203ENST00000510736 587 ntTSL 5 BASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 IGHVIII-67-3-201ENST00000517650 232 ntBASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 SLN-202ENST00000525934 436 ntAPPRIS P1 TSL 3 BASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 OR4A11P-201ENST00000529557 906 ntBASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 DAZAP2-210ENST00000551313 587 ntTSL 3 BASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 ACTR6-209ENST00000551617 1715 ntTSL 5 BASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 AL355922.4-201ENST00000555642 449 ntTSL 3 BASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 IGHV1OR15-4-201ENST00000560037 348 ntBASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 LINC01198-208ENST00000599175 560 ntTSL 5 BASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 LZTS1-204ENST00000616228 231 ntTSL 2 BASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 FER-209ENST00000618353 1420 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 CCL4L2-216ENST00000620098 836 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 AC002044.3-201ENST00000623314 541 ntBASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 AC134981.1-201ENST00000628076 348 ntBASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 EGF-204ENST00000503392 3642 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 AURKA-203ENST00000371356 2112 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 GPR156-201ENST00000315843 4193 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 WDHD1-202ENST00000420358 3722 ntTSL 5 BASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 CCDC39-201ENST00000442201 3279 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 GUCY1A3-202ENST00000393832 4286 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 DNAI1-201ENST00000242317 2504 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 AL353807.3-201ENST00000500626 2505 ntBASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 LINC00663-203ENST00000586885 2546 ntBASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 GNRH1-201ENST00000276414 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CDK5RAP1Q96SZ6 NEK10-201ENST00000295720 2871 ntTSL 2 BASIC8.32□□□□□ -1.08
CDK5RAP1Q96SZ6 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC8.32□□□□□ -1.08
CDK5RAP1Q96SZ6 AC012360.3-201ENST00000610036 3449 ntBASIC8.32□□□□□ -1.08
CDK5RAP1Q96SZ6 USP3-201ENST00000268049 5311 ntTSL 5 BASIC8.32□□□□□ -1.08
CDK5RAP1Q96SZ6 AC008937.3-201ENST00000606813 1700 ntBASIC8.32□□□□□ -1.08
CDK5RAP1Q96SZ6 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms