Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 AP003122.2-201ENST00000527332 486 ntTSL 3 BASIC8.63□□□□□ -1.03
UBE4BO95155 AP006587.2-201ENST00000530696 493 ntBASIC8.63□□□□□ -1.03
UBE4BO95155 AP003174.3-201ENST00000537926 516 ntBASIC8.63□□□□□ -1.03
UBE4BO95155 AC137767.1-202ENST00000543072 752 ntTSL 2 BASIC8.63□□□□□ -1.03
UBE4BO95155 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC8.63□□□□□ -1.03
UBE4BO95155 THAP2-202ENST00000547843 672 ntTSL 2 BASIC8.63□□□□□ -1.03
UBE4BO95155 TTC41P-204ENST00000548897 2998 ntTSL 5 BASIC8.63□□□□□ -1.03
UBE4BO95155 GNPTAB-203ENST00000549165 373 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
UBE4BO95155 LINC01588-213ENST00000557142 492 ntTSL 3 BASIC8.63□□□□□ -1.03
UBE4BO95155 ULK4P3-201ENST00000563895 440 ntBASIC8.63□□□□□ -1.03
UBE4BO95155 AC073911.1-201ENST00000592296 504 ntTSL 5 BASIC8.63□□□□□ -1.03
UBE4BO95155 YTHDF2P1-201ENST00000604759 1271 ntBASIC8.63□□□□□ -1.03
UBE4BO95155 RN7SL3-201ENST00000610674 299 ntBASIC8.63□□□□□ -1.03
UBE4BO95155 AC103974.2-201ENST00000611319 778 ntBASIC8.63□□□□□ -1.03
UBE4BO95155 AL606760.4-201ENST00000617613 718 ntBASIC8.63□□□□□ -1.03
UBE4BO95155 AC012557.3-201ENST00000626439 255 ntBASIC8.63□□□□□ -1.03
UBE4BO95155 SPRR5-201ENST00000636302 817 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
UBE4BO95155 ANKS1B-211ENST00000547776 3885 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
UBE4BO95155 B3GALT5-202ENST00000380618 2763 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
UBE4BO95155 ZNF577-201ENST00000301399 3074 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
UBE4BO95155 FAM118B-201ENST00000360194 1616 ntAPPRIS ALT1 TSL 5 BASIC8.63□□□□□ -1.03
UBE4BO95155 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC8.63□□□□□ -1.03
UBE4BO95155 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
UBE4BO95155 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
UBE4BO95155 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC8.63□□□□□ -1.03
UBE4BO95155 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
UBE4BO95155 AC016251.1-201ENST00000624299 4198 ntBASIC8.63□□□□□ -1.03
UBE4BO95155 PLPPR1-202ENST00000395056 2318 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
UBE4BO95155 FOPNL-206ENST00000573968 2039 ntTSL 2 BASIC8.63□□□□□ -1.03
UBE4BO95155 RNASEH2B-AS1-209ENST00000631080 1707 ntTSL 5 BASIC8.63□□□□□ -1.03
UBE4BO95155 CKAP2-203ENST00000378037 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
UBE4BO95155 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC8.63□□□□□ -1.03
UBE4BO95155 DDX24-201ENST00000330836 2738 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
UBE4BO95155 AC116366.1-201ENST00000443093 3730 ntTSL 5 BASIC8.63□□□□□ -1.03
UBE4BO95155 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
UBE4BO95155 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC8.63□□□□□ -1.03
UBE4BO95155 LINC01103-201ENST00000430551 1457 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
UBE4BO95155 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC8.63□□□□□ -1.03
UBE4BO95155 AC023154.1-203ENST00000508813 2465 ntTSL 2 BASIC8.63□□□□□ -1.03
UBE4BO95155 TMPRSS11D-201ENST00000283916 2817 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
UBE4BO95155 MAPK10-347ENST00000641762 2856 ntBASIC8.62□□□□□ -1.03
UBE4BO95155 AC022415.1-201ENST00000472362 1517 ntBASIC8.62□□□□□ -1.03
UBE4BO95155 AP4S1-211ENST00000616371 4595 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
UBE4BO95155 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
UBE4BO95155 BCAT1-202ENST00000342945 4319 ntTSL 2 BASIC8.62□□□□□ -1.03
UBE4BO95155 DNAJC5G-202ENST00000402462 1904 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
UBE4BO95155 TREML2-201ENST00000483722 3302 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
UBE4BO95155 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
UBE4BO95155 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
UBE4BO95155 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
UBE4BO95155 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
UBE4BO95155 RPS3A-201ENST00000274065 934 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
UBE4BO95155 IGHV4-59-201ENST00000390629 495 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
UBE4BO95155 ETFBKMT-203ENST00000412352 1083 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
UBE4BO95155 CD59-206ENST00000445143 825 ntAPPRIS P2 TSL 3 BASIC8.62□□□□□ -1.03
UBE4BO95155 YWHABP1-201ENST00000445359 727 ntBASIC8.62□□□□□ -1.03
UBE4BO95155 MED28P8-201ENST00000454831 521 ntBASIC8.62□□□□□ -1.03
UBE4BO95155 TNR-IT1-201ENST00000455447 630 ntTSL 3 BASIC8.62□□□□□ -1.03
UBE4BO95155 AC111198.1-201ENST00000505575 606 ntTSL 4 BASIC8.62□□□□□ -1.03
UBE4BO95155 AC083902.1-201ENST00000508578 359 ntTSL 5 BASIC8.62□□□□□ -1.03
UBE4BO95155 LINC01591-202ENST00000522279 1240 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
UBE4BO95155 RASSF8-AS1-204ENST00000535436 1121 ntTSL 4 BASIC8.62□□□□□ -1.03
UBE4BO95155 AC026111.1-201ENST00000551090 1195 ntBASIC8.62□□□□□ -1.03
UBE4BO95155 AC091180.5-201ENST00000576461 382 ntTSL 5 BASIC8.62□□□□□ -1.03
UBE4BO95155 TTN-AS1-210ENST00000578746 677 ntTSL 3 BASIC8.62□□□□□ -1.03
UBE4BO95155 AC004477.2-201ENST00000583349 192 ntTSL 3 BASIC8.62□□□□□ -1.03
UBE4BO95155 LINC01515-209ENST00000599409 755 ntTSL 5 BASIC8.62□□□□□ -1.03
UBE4BO95155 CACNB2-213ENST00000612134 3825 ntTSL 5 BASIC8.62□□□□□ -1.03
UBE4BO95155 AP000851.2-201ENST00000629499 721 ntTSL 3 BASIC8.62□□□□□ -1.03
UBE4BO95155 AC087885.1-201ENST00000641910 848 ntBASIC8.62□□□□□ -1.03
UBE4BO95155 HCCAT5-202ENST00000642127 1029 ntBASIC8.62□□□□□ -1.03
UBE4BO95155 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC8.62□□□□□ -1.03
UBE4BO95155 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
UBE4BO95155 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
UBE4BO95155 NLRP8-202ENST00000590542 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
UBE4BO95155 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
UBE4BO95155 PLAGL1-202ENST00000360537 4430 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
UBE4BO95155 SLC16A1P1-201ENST00000486743 1510 ntBASIC8.62□□□□□ -1.03
UBE4BO95155 TXNRD1-219ENST00000529546 2018 ntTSL 2 BASIC8.62□□□□□ -1.03
UBE4BO95155 ENOX1-AS1-201ENST00000444442 3907 ntTSL 5 BASIC8.61□□□□□ -1.03
UBE4BO95155 COMMD6-205ENST00000406936 1628 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
UBE4BO95155 FHL1-204ENST00000370683 2565 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
UBE4BO95155 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC8.61□□□□□ -1.03
UBE4BO95155 LINC01091-204ENST00000515769 2204 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
UBE4BO95155 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC8.61□□□□□ -1.03
UBE4BO95155 TAAR8-201ENST00000275200 1029 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
UBE4BO95155 AC068137.1-201ENST00000429272 584 ntBASIC8.61□□□□□ -1.03
UBE4BO95155 WWC3-AS1-201ENST00000430057 578 ntTSL 3 BASIC8.61□□□□□ -1.03
UBE4BO95155 AJ006995.1-201ENST00000433344 572 ntTSL 3 BASIC8.61□□□□□ -1.03
UBE4BO95155 AC123768.1-202ENST00000460684 461 ntTSL 3 BASIC8.61□□□□□ -1.03
UBE4BO95155 AC234782.3-201ENST00000461229 433 ntBASIC8.61□□□□□ -1.03
UBE4BO95155 AC233724.1-201ENST00000503894 233 ntBASIC8.61□□□□□ -1.03
UBE4BO95155 LINC01411-204ENST00000510234 938 ntTSL 3 BASIC8.61□□□□□ -1.03
UBE4BO95155 RNA5SP422-201ENST00000516778 111 ntBASIC8.61□□□□□ -1.03
UBE4BO95155 CTHRC1-203ENST00000520337 1198 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
UBE4BO95155 BTF3P1-201ENST00000522014 495 ntBASIC8.61□□□□□ -1.03
UBE4BO95155 NOVA1-209ENST00000547619 947 ntTSL 3 BASIC8.61□□□□□ -1.03
UBE4BO95155 FDPSP3-201ENST00000556903 1013 ntBASIC8.61□□□□□ -1.03
UBE4BO95155 AL591767.1-201ENST00000557160 568 ntTSL 4 BASIC8.61□□□□□ -1.03
UBE4BO95155 AC003002.3-201ENST00000597410 521 ntAPPRIS P1 TSL 3 BASIC8.61□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms